Protein–RNA interactions for Protein: Q9HBF4

ZFYVE1, Zinc finger FYVE domain-containing protein 1, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1Q9HBF4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZFYVE1Q9HBF4 SLC25A1P2-201ENST00000430693 912 ntBASIC18.96■□□□□ 0.63
ZFYVE1Q9HBF4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZFYVE1Q9HBF4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.96■□□□□ 0.63
ZFYVE1Q9HBF4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZFYVE1Q9HBF4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.96■□□□□ 0.63
ZFYVE1Q9HBF4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ZFYVE1Q9HBF4 NAPSB-206ENST00000562112 1266 ntBASIC18.96■□□□□ 0.63
ZFYVE1Q9HBF4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZFYVE1Q9HBF4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZFYVE1Q9HBF4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZFYVE1Q9HBF4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZFYVE1Q9HBF4 CYP2D8P-201ENST00000433633 1490 ntBASIC18.96■□□□□ 0.63
ZFYVE1Q9HBF4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZFYVE1Q9HBF4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 KRT8P3-201ENST00000519669 1449 ntBASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 AC087499.1-201ENST00000418141 1075 ntBASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.95■□□□□ 0.62
ZFYVE1Q9HBF4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 TSPY14P-201ENST00000303979 915 ntBASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 CCR12P-201ENST00000446203 998 ntBASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 AC010947.1-201ENST00000623454 693 ntBASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ZFYVE1Q9HBF4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 TSPY17P-201ENST00000450329 467 ntBASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 EGLN1P1-201ENST00000531623 762 ntBASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.93■□□□□ 0.62
ZFYVE1Q9HBF4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZFYVE1Q9HBF4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms