Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S3Q96PC3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 KRT18P14-201ENST00000534205 1250 ntBASIC14.29□□□□□ -0.12
AP1S3Q96PC3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S3Q96PC3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 AL162412.1-201ENST00000567129 965 ntBASIC14.28□□□□□ -0.12
AP1S3Q96PC3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.28□□□□□ -0.12
AP1S3Q96PC3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
AP1S3Q96PC3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S3Q96PC3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S3Q96PC3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.27□□□□□ -0.12
AP1S3Q96PC3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
AP1S3Q96PC3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S3Q96PC3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S3Q96PC3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S3Q96PC3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S3Q96PC3 PHGDH-210ENST00000641115 1638 ntBASIC14.27□□□□□ -0.12
AP1S3Q96PC3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S3Q96PC3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
AP1S3Q96PC3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S3Q96PC3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S3Q96PC3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S3Q96PC3 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.27□□□□□ -0.12
AP1S3Q96PC3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
AP1S3Q96PC3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms