Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 FEM1AP3-201ENST00000403722 1741 ntBASIC17.86■□□□□ 0.45
LPCAT4Q643R3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 AL139384.1-201ENST00000612143 3047 ntBASIC17.86■□□□□ 0.45
LPCAT4Q643R3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LPCAT4Q643R3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 AC091305.1-201ENST00000479476 895 ntBASIC17.85■□□□□ 0.45
LPCAT4Q643R3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 AF213884.3-201ENST00000563833 479 ntBASIC17.85■□□□□ 0.45
LPCAT4Q643R3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 AC141586.5-201ENST00000624546 2050 ntBASIC17.85■□□□□ 0.45
LPCAT4Q643R3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LPCAT4Q643R3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.84■□□□□ 0.45
LPCAT4Q643R3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 MIR939-201ENST00000401314 82 ntBASIC17.84■□□□□ 0.45
LPCAT4Q643R3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LPCAT4Q643R3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LPCAT4Q643R3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LPCAT4Q643R3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LPCAT4Q643R3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LPCAT4Q643R3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LPCAT4Q643R3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.83■□□□□ 0.45
LPCAT4Q643R3 AC108860.2-201ENST00000562760 2183 ntBASIC17.83■□□□□ 0.45
LPCAT4Q643R3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LPCAT4Q643R3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.83■□□□□ 0.45
LPCAT4Q643R3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.83■□□□□ 0.45
LPCAT4Q643R3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms