Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2AP49459 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
UBE2AP49459 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12□□□□□ -0.49
UBE2AP49459 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC12□□□□□ -0.49
UBE2AP49459 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12□□□□□ -0.49
UBE2AP49459 HLA-L-209ENST00000420110 1011 ntBASIC12□□□□□ -0.49
UBE2AP49459 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC12□□□□□ -0.49
UBE2AP49459 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC12□□□□□ -0.49
UBE2AP49459 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC12□□□□□ -0.49
UBE2AP49459 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC12□□□□□ -0.49
UBE2AP49459 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC12□□□□□ -0.49
UBE2AP49459 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12□□□□□ -0.49
UBE2AP49459 AL121829.2-201ENST00000620908 328 ntBASIC12□□□□□ -0.49
UBE2AP49459 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12□□□□□ -0.49
UBE2AP49459 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC12□□□□□ -0.49
UBE2AP49459 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
UBE2AP49459 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12□□□□□ -0.49
UBE2AP49459 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2AP49459 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC12□□□□□ -0.49
UBE2AP49459 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2AP49459 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2AP49459 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2AP49459 KRT8P8-201ENST00000434750 1448 ntBASIC12□□□□□ -0.49
UBE2AP49459 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2AP49459 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
UBE2AP49459 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2AP49459 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2AP49459 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC12□□□□□ -0.49
UBE2AP49459 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC12□□□□□ -0.49
UBE2AP49459 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
UBE2AP49459 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC12□□□□□ -0.49
UBE2AP49459 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC12□□□□□ -0.49
UBE2AP49459 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC12□□□□□ -0.49
UBE2AP49459 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2AP49459 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
UBE2AP49459 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2AP49459 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC12□□□□□ -0.49
UBE2AP49459 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
UBE2AP49459 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
UBE2AP49459 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
UBE2AP49459 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 AC004408.2-201ENST00000623613 2777 ntBASIC11.99□□□□□ -0.49
UBE2AP49459 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2AP49459 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2AP49459 APTR-205ENST00000447009 902 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2AP49459 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2AP49459 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2AP49459 SLC29A4P2-201ENST00000504749 1089 ntBASIC11.99□□□□□ -0.49
UBE2AP49459 RNA5SP413-201ENST00000516373 109 ntBASIC11.99□□□□□ -0.49
UBE2AP49459 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC11.99□□□□□ -0.49
UBE2AP49459 AC142086.2-201ENST00000569753 217 ntBASIC11.99□□□□□ -0.49
UBE2AP49459 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2AP49459 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
UBE2AP49459 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
UBE2AP49459 ZNF815P-204ENST00000434898 1737 ntBASIC11.99□□□□□ -0.49
UBE2AP49459 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC11.99□□□□□ -0.49
UBE2AP49459 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
UBE2AP49459 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
UBE2AP49459 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2AP49459 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2AP49459 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2AP49459 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2AP49459 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2AP49459 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2AP49459 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2AP49459 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2AP49459 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2AP49459 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
UBE2AP49459 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2AP49459 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC11.98□□□□□ -0.49
UBE2AP49459 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC11.98□□□□□ -0.49
UBE2AP49459 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2AP49459 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2AP49459 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
UBE2AP49459 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC11.98□□□□□ -0.49
UBE2AP49459 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms