Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC005181.1-201ENST00000604782 1256 ntBASIC12.97□□□□□ -0.33
NDUFA1O15239 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC12.97□□□□□ -0.33
NDUFA1O15239 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC12.97□□□□□ -0.33
NDUFA1O15239 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA1O15239 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
NDUFA1O15239 GATB-213ENST00000515812 1893 ntTSL 5 BASIC12.97□□□□□ -0.33
NDUFA1O15239 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NDUFA1O15239 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA1O15239 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NDUFA1O15239 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA1O15239 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NDUFA1O15239 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFA1O15239 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFA1O15239 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFA1O15239 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
NDUFA1O15239 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC12.96□□□□□ -0.33
NDUFA1O15239 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFA1O15239 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NDUFA1O15239 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFA1O15239 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFA1O15239 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFA1O15239 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
NDUFA1O15239 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFA1O15239 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFA1O15239 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFA1O15239 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFA1O15239 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
NDUFA1O15239 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NDUFA1O15239 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFA1O15239 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
NDUFA1O15239 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFA1O15239 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFA1O15239 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFA1O15239 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC12.96□□□□□ -0.33
NDUFA1O15239 AL390719.1-204ENST00000412397 1219 ntBASIC12.96□□□□□ -0.33
NDUFA1O15239 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFA1O15239 MAZ-216ENST00000616501 991 ntTSL 5 BASIC12.96□□□□□ -0.33
NDUFA1O15239 ANKRD20A6P-201ENST00000618763 204 ntBASIC12.96□□□□□ -0.33
NDUFA1O15239 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFA1O15239 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC12.96□□□□□ -0.33
NDUFA1O15239 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFA1O15239 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NDUFA1O15239 CROCCP1-201ENST00000426910 5675 ntBASIC12.96□□□□□ -0.33
NDUFA1O15239 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NDUFA1O15239 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
NDUFA1O15239 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
NDUFA1O15239 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC12.96□□□□□ -0.34
NDUFA1O15239 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NDUFA1O15239 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC12.96□□□□□ -0.34
NDUFA1O15239 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NDUFA1O15239 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NDUFA1O15239 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NDUFA1O15239 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC12.96□□□□□ -0.34
NDUFA1O15239 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC12.95□□□□□ -0.34
NDUFA1O15239 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC12.95□□□□□ -0.34
NDUFA1O15239 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NDUFA1O15239 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NDUFA1O15239 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC12.95□□□□□ -0.34
NDUFA1O15239 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 SERPINH1P1-201ENST00000419794 1249 ntBASIC12.95□□□□□ -0.34
NDUFA1O15239 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
NDUFA1O15239 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC12.95□□□□□ -0.34
NDUFA1O15239 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC12.95□□□□□ -0.34
NDUFA1O15239 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC12.95□□□□□ -0.34
NDUFA1O15239 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NDUFA1O15239 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NDUFA1O15239 ANO7L1-203ENST00000602586 1720 ntBASIC12.95□□□□□ -0.34
NDUFA1O15239 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
NDUFA1O15239 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC12.95□□□□□ -0.34
NDUFA1O15239 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC12.95□□□□□ -0.34
NDUFA1O15239 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NDUFA1O15239 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NDUFA1O15239 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NDUFA1O15239 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.95□□□□□ -0.34
NDUFA1O15239 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NDUFA1O15239 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
NDUFA1O15239 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NDUFA1O15239 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms