Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC188H7C350 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC188H7C350 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC188H7C350 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCDC188H7C350 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC188H7C350 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
CCDC188H7C350 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC188H7C350 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC188H7C350 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC188H7C350 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC188H7C350 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC188H7C350 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC188H7C350 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC188H7C350 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC188H7C350 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC188H7C350 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC188H7C350 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC188H7C350 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC188H7C350 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC188H7C350 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC188H7C350 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC188H7C350 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCDC188H7C350 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC188H7C350 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC188H7C350 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC188H7C350 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC188H7C350 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC188H7C350 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC188H7C350 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC188H7C350 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCDC188H7C350 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC188H7C350 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC188H7C350 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC188H7C350 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC188H7C350 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC188H7C350 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC188H7C350 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC188H7C350 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 HEIH-201ENST00000623091 1652 ntBASIC19.68■□□□□ 0.74
CCDC188H7C350 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC188H7C350 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC188H7C350 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC188H7C350 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC188H7C350 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC188H7C350 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 MIPEPP3-201ENST00000412105 444 ntBASIC19.68■□□□□ 0.74
CCDC188H7C350 TSPY23P-201ENST00000440136 739 ntBASIC19.68■□□□□ 0.74
CCDC188H7C350 AC091874.3-201ENST00000512672 1195 ntBASIC19.68■□□□□ 0.74
CCDC188H7C350 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC188H7C350 AC092118.2-201ENST00000613495 667 ntBASIC19.68■□□□□ 0.74
CCDC188H7C350 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC188H7C350 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC188H7C350 AC008764.6-201ENST00000595909 2069 ntBASIC19.67■□□□□ 0.74
CCDC188H7C350 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.67■□□□□ 0.74
CCDC188H7C350 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC188H7C350 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
CCDC188H7C350 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC188H7C350 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC188H7C350 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC188H7C350 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC188H7C350 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC188H7C350 AC092368.3-202ENST00000574180 1591 ntBASIC19.67■□□□□ 0.74
CCDC188H7C350 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC188H7C350 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC188H7C350 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC188H7C350 LTB4R2-202ENST00000528054 3092 ntBASIC19.67■□□□□ 0.74
CCDC188H7C350 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC188H7C350 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC188H7C350 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC188H7C350 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.67■□□□□ 0.74
CCDC188H7C350 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC188H7C350 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC188H7C350 HLA-B-256ENST00000639848 1089 ntBASIC19.67■□□□□ 0.74
CCDC188H7C350 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC188H7C350 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC188H7C350 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC188H7C350 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC188H7C350 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CCDC188H7C350 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC188H7C350 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC188H7C350 AC067852.2-201ENST00000590513 2313 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms