Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 AC233992.3-201ENST00000607491 485 ntBASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 KRT87P-202ENST00000534226 1464 ntBASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 AC243732.1-201ENST00000612648 864 ntBASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 AC083906.6-201ENST00000641366 219 ntBASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.96□□□□□ -0.01
RBFOX3A6NFN3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.96□□□□□ -0.02
RBFOX3A6NFN3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RBFOX3A6NFN3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
RBFOX3A6NFN3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RBFOX3A6NFN3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RBFOX3A6NFN3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RBFOX3A6NFN3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 CDV3P1-201ENST00000471403 739 ntBASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 SLC7A5P2-201ENST00000553010 536 ntBASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 AC135776.1-201ENST00000319817 2481 ntBASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RBFOX3A6NFN3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms