Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV9-2A0A087WT02 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV9-2A0A087WT02 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV9-2A0A087WT02 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
TRAV9-2A0A087WT02 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV9-2A0A087WT02 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV9-2A0A087WT02 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV9-2A0A087WT02 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV9-2A0A087WT02 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV9-2A0A087WT02 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV9-2A0A087WT02 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV9-2A0A087WT02 AL391005.1-201ENST00000623953 2435 ntBASIC14.1□□□□□ -0.15
TRAV9-2A0A087WT02 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV9-2A0A087WT02 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV9-2A0A087WT02 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 NCF1B-203ENST00000435988 1254 ntBASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 AC083906.2-201ENST00000511578 360 ntBASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 AL109923.1-201ENST00000618799 583 ntBASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 Z98044.1-201ENST00000632503 1764 ntBASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV9-2A0A087WT02 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
TRAV9-2A0A087WT02 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV9-2A0A087WT02 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.08□□□□□ -0.15
TRAV9-2A0A087WT02 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.08□□□□□ -0.15
TRAV9-2A0A087WT02 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV9-2A0A087WT02 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.08□□□□□ -0.15
TRAV9-2A0A087WT02 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV9-2A0A087WT02 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 AL512625.2-201ENST00000417533 625 ntBASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 CROCCP5-201ENST00000436658 830 ntBASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 AC105036.2-201ENST00000569468 176 ntBASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 BX119927.1-201ENST00000636596 1552 ntBASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TRAV9-2A0A087WT02 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV9-2A0A087WT02 AL356309.3-201ENST00000624132 1934 ntBASIC14.07□□□□□ -0.16
TRAV9-2A0A087WT02 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV9-2A0A087WT02 AC068338.2-201ENST00000563278 1430 ntBASIC14.07□□□□□ -0.16
TRAV9-2A0A087WT02 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV9-2A0A087WT02 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV9-2A0A087WT02 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV9-2A0A087WT02 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV9-2A0A087WT02 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV9-2A0A087WT02 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV9-2A0A087WT02 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRAV9-2A0A087WT02 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV9-2A0A087WT02 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV9-2A0A087WT02 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAV9-2A0A087WT02 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms