Protein–RNA interactions for Protein: Q9Y5J5

PHLDA3, Pleckstrin homology-like domain family A member 3, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3Q9Y5J5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHLDA3Q9Y5J5 AL031598.1-201ENST00000561511 1773 ntBASIC14.04□□□□□ -0.16
PHLDA3Q9Y5J5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 MKRN4P-201ENST00000444706 1521 ntBASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 AL390961.4-201ENST00000623958 2535 ntBASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
PHLDA3Q9Y5J5 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.02□□□□□ -0.16
PHLDA3Q9Y5J5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PHLDA3Q9Y5J5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.02□□□□□ -0.16
PHLDA3Q9Y5J5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PHLDA3Q9Y5J5 SDHAP1-207ENST00000440850 2000 ntBASIC14.02□□□□□ -0.16
PHLDA3Q9Y5J5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PHLDA3Q9Y5J5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PHLDA3Q9Y5J5 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PHLDA3Q9Y5J5 AC104417.2-201ENST00000562989 1793 ntBASIC14.02□□□□□ -0.16
PHLDA3Q9Y5J5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PHLDA3Q9Y5J5 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.02□□□□□ -0.16
PHLDA3Q9Y5J5 AC093525.10-201ENST00000625130 1569 ntBASIC14.02□□□□□ -0.16
PHLDA3Q9Y5J5 AP006587.1-201ENST00000534129 1502 ntBASIC14.02□□□□□ -0.16
PHLDA3Q9Y5J5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PHLDA3Q9Y5J5 KRT8P8-201ENST00000434750 1448 ntBASIC14.02□□□□□ -0.16
PHLDA3Q9Y5J5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC14.02□□□□□ -0.16
PHLDA3Q9Y5J5 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 AC073210.2-201ENST00000430369 194 ntBASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 AC005829.2-201ENST00000571422 1056 ntBASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
PHLDA3Q9Y5J5 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
PHLDA3Q9Y5J5 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHLDA3Q9Y5J5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.01□□□□□ -0.17
PHLDA3Q9Y5J5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHLDA3Q9Y5J5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHLDA3Q9Y5J5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
PHLDA3Q9Y5J5 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHLDA3Q9Y5J5 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHLDA3Q9Y5J5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHLDA3Q9Y5J5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PHLDA3Q9Y5J5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHLDA3Q9Y5J5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PHLDA3Q9Y5J5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHLDA3Q9Y5J5 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms