Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 AL160286.2-201ENST00000567150 934 ntBASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 AL031985.4-201ENST00000642138 673 ntBASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00474Q9P2X8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 AF186192.3-201ENST00000583427 947 ntBASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 TREX1-205ENST00000625293 1783 ntBASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 MME-217ENST00000616757 1315 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00474Q9P2X8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00474Q9P2X8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms