Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBP1Q9NZI7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBP1Q9NZI7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBP1Q9NZI7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UBP1Q9NZI7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBP1Q9NZI7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBP1Q9NZI7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.31■□□□□ 0.68
UBP1Q9NZI7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.31■□□□□ 0.68
UBP1Q9NZI7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBP1Q9NZI7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.31■□□□□ 0.68
UBP1Q9NZI7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.31■□□□□ 0.68
UBP1Q9NZI7 B3GAT3P1-201ENST00000471720 806 ntBASIC19.31■□□□□ 0.68
UBP1Q9NZI7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBP1Q9NZI7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.31■□□□□ 0.68
UBP1Q9NZI7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.31■□□□□ 0.68
UBP1Q9NZI7 AC233702.5-201ENST00000584107 538 ntBASIC19.31■□□□□ 0.68
UBP1Q9NZI7 MIR6786-201ENST00000616843 113 ntBASIC19.31■□□□□ 0.68
UBP1Q9NZI7 AL049637.2-201ENST00000641778 930 ntBASIC19.31■□□□□ 0.68
UBP1Q9NZI7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBP1Q9NZI7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.31■□□□□ 0.68
UBP1Q9NZI7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.31■□□□□ 0.68
UBP1Q9NZI7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBP1Q9NZI7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.31■□□□□ 0.68
UBP1Q9NZI7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBP1Q9NZI7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 CROCCP3-202ENST00000420820 1947 ntBASIC19.3■□□□□ 0.68
UBP1Q9NZI7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 AC012618.2-201ENST00000428058 849 ntBASIC19.3■□□□□ 0.68
UBP1Q9NZI7 AC008550.1-201ENST00000511500 884 ntBASIC19.3■□□□□ 0.68
UBP1Q9NZI7 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBP1Q9NZI7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 MESTP1-201ENST00000404287 994 ntBASIC19.29■□□□□ 0.68
UBP1Q9NZI7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 AC026271.3-201ENST00000571884 352 ntBASIC19.29■□□□□ 0.68
UBP1Q9NZI7 AC130371.2-201ENST00000619443 611 ntBASIC19.29■□□□□ 0.68
UBP1Q9NZI7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
UBP1Q9NZI7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.28■□□□□ 0.68
UBP1Q9NZI7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.28■□□□□ 0.68
UBP1Q9NZI7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBP1Q9NZI7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
UBP1Q9NZI7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBP1Q9NZI7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBP1Q9NZI7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
UBP1Q9NZI7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
UBP1Q9NZI7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms