Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CTPS2Q9NRF8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CTPS2Q9NRF8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.64■□□□□ 0.42
CTPS2Q9NRF8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CTPS2Q9NRF8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CTPS2Q9NRF8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 AC004264.1-201ENST00000608354 794 ntBASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 AC124016.1-201ENST00000609552 612 ntBASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 ITM2C-210ENST00000620962 501 ntBASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.64■□□□□ 0.41
CTPS2Q9NRF8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 AL138781.2-201ENST00000617896 1843 ntBASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 KRT18P29-201ENST00000397031 1267 ntBASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 C1QBPP2-201ENST00000528754 825 ntBASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.63■□□□□ 0.41
CTPS2Q9NRF8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms