Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LCE3DQ9BYE3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 HLA-G-202ENST00000376815 851 ntBASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 HLA-G-203ENST00000376818 1127 ntBASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 AC091799.1-201ENST00000422823 811 ntBASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 AC079140.4-201ENST00000507448 529 ntBASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 AL031963.3-201ENST00000606441 850 ntBASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 MPST-208ENST00000628507 698 ntTSL 5 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 TSPY26P-201ENST00000476365 1326 ntBASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
LCE3DQ9BYE3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms