Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLNQ969V3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLNQ969V3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLNQ969V3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCLNQ969V3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCLNQ969V3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.39■□□□□ 0.53
NCLNQ969V3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLNQ969V3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCLNQ969V3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NCLNQ969V3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.39■□□□□ 0.53
NCLNQ969V3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.39■□□□□ 0.53
NCLNQ969V3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
NCLNQ969V3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCLNQ969V3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.39■□□□□ 0.53
NCLNQ969V3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.39■□□□□ 0.53
NCLNQ969V3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLNQ969V3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCLNQ969V3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLNQ969V3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.39■□□□□ 0.53
NCLNQ969V3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCLNQ969V3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NCLNQ969V3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLNQ969V3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCLNQ969V3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NCLNQ969V3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.39■□□□□ 0.53
NCLNQ969V3 NBPF21P-201ENST00000425093 1451 ntBASIC18.39■□□□□ 0.53
NCLNQ969V3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NCLNQ969V3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCLNQ969V3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.38■□□□□ 0.53
NCLNQ969V3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLNQ969V3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.38■□□□□ 0.53
NCLNQ969V3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLNQ969V3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLNQ969V3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLNQ969V3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NCLNQ969V3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.38■□□□□ 0.53
NCLNQ969V3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.38■□□□□ 0.53
NCLNQ969V3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.38■□□□□ 0.53
NCLNQ969V3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.38■□□□□ 0.53
NCLNQ969V3 AP006294.2-201ENST00000641667 209 ntBASIC18.38■□□□□ 0.53
NCLNQ969V3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NCLNQ969V3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLNQ969V3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLNQ969V3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NCLNQ969V3 TFP1-202ENST00000475455 1573 ntBASIC18.38■□□□□ 0.53
NCLNQ969V3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLNQ969V3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCLNQ969V3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLNQ969V3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLNQ969V3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.37■□□□□ 0.53
NCLNQ969V3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLNQ969V3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NCLNQ969V3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLNQ969V3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLNQ969V3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLNQ969V3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLNQ969V3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLNQ969V3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLNQ969V3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLNQ969V3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
NCLNQ969V3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLNQ969V3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.37■□□□□ 0.53
NCLNQ969V3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NCLNQ969V3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.37■□□□□ 0.53
NCLNQ969V3 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.37■□□□□ 0.53
NCLNQ969V3 AC093827.2-201ENST00000512654 315 ntBASIC18.37■□□□□ 0.53
NCLNQ969V3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.37■□□□□ 0.53
NCLNQ969V3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NCLNQ969V3 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.37■□□□□ 0.53
NCLNQ969V3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLNQ969V3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCLNQ969V3 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.37■□□□□ 0.53
NCLNQ969V3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.37■□□□□ 0.53
NCLNQ969V3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NCLNQ969V3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.37■□□□□ 0.53
NCLNQ969V3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.37■□□□□ 0.53
NCLNQ969V3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.37■□□□□ 0.53
NCLNQ969V3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLNQ969V3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLNQ969V3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLNQ969V3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLNQ969V3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLNQ969V3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLNQ969V3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLNQ969V3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLNQ969V3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCLNQ969V3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.36■□□□□ 0.53
NCLNQ969V3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLNQ969V3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.36■□□□□ 0.53
NCLNQ969V3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.36■□□□□ 0.53
NCLNQ969V3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NCLNQ969V3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NCLNQ969V3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.36■□□□□ 0.53
NCLNQ969V3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.36■□□□□ 0.53
NCLNQ969V3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.36■□□□□ 0.53
NCLNQ969V3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.36■□□□□ 0.53
NCLNQ969V3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.36■□□□□ 0.53
NCLNQ969V3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NCLNQ969V3 AL138781.2-201ENST00000617896 1843 ntBASIC18.36■□□□□ 0.53
NCLNQ969V3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms