Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC25Q86WR0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC25Q86WR0 AC073210.2-201ENST00000430369 194 ntBASIC19.58■□□□□ 0.72
CCDC25Q86WR0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC25Q86WR0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC25Q86WR0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.58■□□□□ 0.72
CCDC25Q86WR0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC25Q86WR0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CCDC25Q86WR0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC25Q86WR0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC25Q86WR0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC25Q86WR0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CCDC25Q86WR0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC25Q86WR0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC25Q86WR0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC25Q86WR0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC25Q86WR0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC25Q86WR0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC25Q86WR0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC25Q86WR0 LTB4R2-202ENST00000528054 3092 ntBASIC19.57■□□□□ 0.72
CCDC25Q86WR0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 ANO7L1-203ENST00000602586 1720 ntBASIC19.57■□□□□ 0.72
CCDC25Q86WR0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC25Q86WR0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 YBX1P10-201ENST00000444752 975 ntBASIC19.56■□□□□ 0.72
CCDC25Q86WR0 AF201337.1-201ENST00000520239 748 ntBASIC19.56■□□□□ 0.72
CCDC25Q86WR0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 FEM1AP3-201ENST00000403722 1741 ntBASIC19.56■□□□□ 0.72
CCDC25Q86WR0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC25Q86WR0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC25Q86WR0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC25Q86WR0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC25Q86WR0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms