Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MRPL55Q7Z7F7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 LETM1P2-201ENST00000597330 2178 ntBASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MRPL55Q7Z7F7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC12.21□□□□□ -0.46
MRPL55Q7Z7F7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.21□□□□□ -0.46
MRPL55Q7Z7F7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
MRPL55Q7Z7F7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
MRPL55Q7Z7F7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
MRPL55Q7Z7F7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
MRPL55Q7Z7F7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC12.21□□□□□ -0.46
MRPL55Q7Z7F7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 SDHAP1-207ENST00000440850 2000 ntBASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 AC104771.1-201ENST00000603335 964 ntBASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
MRPL55Q7Z7F7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms