Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBXN1Q04323 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBXN1Q04323 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.79■□□□□ 0.92
UBXN1Q04323 TSPY21P-201ENST00000433481 731 ntBASIC20.79■□□□□ 0.92
UBXN1Q04323 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBXN1Q04323 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.79■□□□□ 0.92
UBXN1Q04323 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
UBXN1Q04323 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.79■□□□□ 0.92
UBXN1Q04323 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UBXN1Q04323 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
UBXN1Q04323 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
UBXN1Q04323 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.79■□□□□ 0.92
UBXN1Q04323 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBXN1Q04323 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
UBXN1Q04323 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
UBXN1Q04323 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBXN1Q04323 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBXN1Q04323 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBXN1Q04323 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.78■□□□□ 0.92
UBXN1Q04323 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBXN1Q04323 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
UBXN1Q04323 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBXN1Q04323 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBXN1Q04323 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.78■□□□□ 0.92
UBXN1Q04323 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.78■□□□□ 0.92
UBXN1Q04323 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.78■□□□□ 0.92
UBXN1Q04323 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.78■□□□□ 0.92
UBXN1Q04323 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.78■□□□□ 0.92
UBXN1Q04323 NBPF21P-201ENST00000425093 1451 ntBASIC20.78■□□□□ 0.92
UBXN1Q04323 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.78■□□□□ 0.92
UBXN1Q04323 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.78■□□□□ 0.92
UBXN1Q04323 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.78■□□□□ 0.92
UBXN1Q04323 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.78■□□□□ 0.92
UBXN1Q04323 AC142086.2-201ENST00000569753 217 ntBASIC20.78■□□□□ 0.92
UBXN1Q04323 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
UBXN1Q04323 AC104771.1-201ENST00000603335 964 ntBASIC20.78■□□□□ 0.92
UBXN1Q04323 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.78■□□□□ 0.92
UBXN1Q04323 HLA-A-209ENST00000638375 975 ntBASIC20.78■□□□□ 0.92
UBXN1Q04323 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.78■□□□□ 0.92
UBXN1Q04323 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBXN1Q04323 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.78■□□□□ 0.92
UBXN1Q04323 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
UBXN1Q04323 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBXN1Q04323 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBXN1Q04323 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBXN1Q04323 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.77■□□□□ 0.92
UBXN1Q04323 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.77■□□□□ 0.92
UBXN1Q04323 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBXN1Q04323 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBXN1Q04323 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.77■□□□□ 0.92
UBXN1Q04323 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBXN1Q04323 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.77■□□□□ 0.92
UBXN1Q04323 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.77■□□□□ 0.92
UBXN1Q04323 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
UBXN1Q04323 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBXN1Q04323 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBXN1Q04323 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBXN1Q04323 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.77■□□□□ 0.92
UBXN1Q04323 AC079598.2-202ENST00000546624 1451 ntBASIC20.77■□□□□ 0.92
UBXN1Q04323 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBXN1Q04323 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.77■□□□□ 0.92
UBXN1Q04323 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBXN1Q04323 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBXN1Q04323 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.77■□□□□ 0.92
UBXN1Q04323 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.77■□□□□ 0.92
UBXN1Q04323 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBXN1Q04323 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBXN1Q04323 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.77■□□□□ 0.92
UBXN1Q04323 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBXN1Q04323 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.77■□□□□ 0.92
UBXN1Q04323 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBXN1Q04323 AC018470.1-201ENST00000624790 3129 ntBASIC20.77■□□□□ 0.92
UBXN1Q04323 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
UBXN1Q04323 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
UBXN1Q04323 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
UBXN1Q04323 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
UBXN1Q04323 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBXN1Q04323 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.76■□□□□ 0.91
UBXN1Q04323 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
UBXN1Q04323 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBXN1Q04323 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
UBXN1Q04323 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
UBXN1Q04323 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBXN1Q04323 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBXN1Q04323 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBXN1Q04323 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBXN1Q04323 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBXN1Q04323 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBXN1Q04323 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBXN1Q04323 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBXN1Q04323 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.76■□□□□ 0.91
UBXN1Q04323 TSPY23P-201ENST00000440136 739 ntBASIC20.76■□□□□ 0.91
UBXN1Q04323 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.76■□□□□ 0.91
UBXN1Q04323 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.76■□□□□ 0.91
UBXN1Q04323 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.76■□□□□ 0.91
UBXN1Q04323 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.76■□□□□ 0.91
UBXN1Q04323 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBXN1Q04323 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
UBXN1Q04323 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
UBXN1Q04323 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms