Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB38P57729 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB38P57729 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB38P57729 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB38P57729 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB38P57729 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RAB38P57729 TSPY17P-201ENST00000450329 467 ntBASIC17.84■□□□□ 0.45
RAB38P57729 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB38P57729 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.84■□□□□ 0.45
RAB38P57729 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
RAB38P57729 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB38P57729 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RAB38P57729 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB38P57729 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.84■□□□□ 0.45
RAB38P57729 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB38P57729 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RAB38P57729 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB38P57729 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
RAB38P57729 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RAB38P57729 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB38P57729 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RAB38P57729 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
RAB38P57729 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.83■□□□□ 0.45
RAB38P57729 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RAB38P57729 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.83■□□□□ 0.45
RAB38P57729 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RAB38P57729 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
RAB38P57729 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB38P57729 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
RAB38P57729 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB38P57729 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
RAB38P57729 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB38P57729 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB38P57729 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.83■□□□□ 0.45
RAB38P57729 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB38P57729 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.83■□□□□ 0.44
RAB38P57729 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
RAB38P57729 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
RAB38P57729 AC128688.1-201ENST00000487626 519 ntBASIC17.83■□□□□ 0.44
RAB38P57729 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.83■□□□□ 0.44
RAB38P57729 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAB38P57729 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.83■□□□□ 0.44
RAB38P57729 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAB38P57729 AL023803.3-201ENST00000615559 522 ntBASIC17.83■□□□□ 0.44
RAB38P57729 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
RAB38P57729 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RAB38P57729 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAB38P57729 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
RAB38P57729 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.83■□□□□ 0.44
RAB38P57729 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RAB38P57729 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB38P57729 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB38P57729 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB38P57729 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB38P57729 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.82■□□□□ 0.44
RAB38P57729 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB38P57729 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.82■□□□□ 0.44
RAB38P57729 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.82■□□□□ 0.44
RAB38P57729 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RAB38P57729 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.82■□□□□ 0.44
RAB38P57729 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.82■□□□□ 0.44
RAB38P57729 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.82■□□□□ 0.44
RAB38P57729 AL353719.1-201ENST00000566847 864 ntBASIC17.82■□□□□ 0.44
RAB38P57729 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RAB38P57729 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB38P57729 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.82■□□□□ 0.44
RAB38P57729 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.82■□□□□ 0.44
RAB38P57729 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB38P57729 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB38P57729 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB38P57729 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB38P57729 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
RAB38P57729 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB38P57729 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB38P57729 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB38P57729 AC092338.2-201ENST00000568827 1415 ntBASIC17.81■□□□□ 0.44
RAB38P57729 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB38P57729 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB38P57729 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB38P57729 LINC01568-207ENST00000641790 1380 ntBASIC17.81■□□□□ 0.44
RAB38P57729 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RAB38P57729 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB38P57729 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB38P57729 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB38P57729 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB38P57729 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.81■□□□□ 0.44
RAB38P57729 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB38P57729 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB38P57729 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.81■□□□□ 0.44
RAB38P57729 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB38P57729 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB38P57729 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.81■□□□□ 0.44
RAB38P57729 AC133561.5-201ENST00000635547 218 ntBASIC17.81■□□□□ 0.44
RAB38P57729 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB38P57729 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
RAB38P57729 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB38P57729 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.81■□□□□ 0.44
RAB38P57729 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB38P57729 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB38P57729 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 391.2 ms