Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH13P55290 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH13P55290 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CDH13P55290 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.56■□□□□ 0.56
CDH13P55290 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.56■□□□□ 0.56
CDH13P55290 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH13P55290 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
CDH13P55290 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH13P55290 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CDH13P55290 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDH13P55290 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
CDH13P55290 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH13P55290 AC069544.1-201ENST00000609399 999 ntBASIC18.56■□□□□ 0.56
CDH13P55290 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH13P55290 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH13P55290 AC090164.3-201ENST00000610780 2143 ntBASIC18.56■□□□□ 0.56
CDH13P55290 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CDH13P55290 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDH13P55290 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH13P55290 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDH13P55290 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH13P55290 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH13P55290 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CDH13P55290 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CDH13P55290 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.55■□□□□ 0.56
CDH13P55290 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CDH13P55290 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.55■□□□□ 0.56
CDH13P55290 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH13P55290 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CDH13P55290 KRT17P3-201ENST00000420566 1262 ntBASIC18.55■□□□□ 0.56
CDH13P55290 TSPY23P-201ENST00000440136 739 ntBASIC18.55■□□□□ 0.56
CDH13P55290 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CDH13P55290 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH13P55290 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH13P55290 AC004264.1-201ENST00000608354 794 ntBASIC18.55■□□□□ 0.56
CDH13P55290 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CDH13P55290 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CDH13P55290 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CDH13P55290 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH13P55290 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH13P55290 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH13P55290 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH13P55290 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH13P55290 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH13P55290 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH13P55290 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH13P55290 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH13P55290 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDH13P55290 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH13P55290 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH13P55290 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH13P55290 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.54■□□□□ 0.56
CDH13P55290 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.54■□□□□ 0.56
CDH13P55290 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH13P55290 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.54■□□□□ 0.56
CDH13P55290 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CDH13P55290 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CDH13P55290 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.54■□□□□ 0.56
CDH13P55290 AL023875.1-201ENST00000640777 796 ntBASIC18.54■□□□□ 0.56
CDH13P55290 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CDH13P55290 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CDH13P55290 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH13P55290 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.54■□□□□ 0.56
CDH13P55290 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDH13P55290 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH13P55290 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH13P55290 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH13P55290 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH13P55290 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH13P55290 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH13P55290 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH13P55290 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH13P55290 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH13P55290 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH13P55290 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH13P55290 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CDH13P55290 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH13P55290 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH13P55290 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH13P55290 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH13P55290 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms