Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMSP52788 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMSP52788 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.76■□□□□ 0.43
SMSP52788 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMSP52788 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMSP52788 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMSP52788 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMSP52788 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SMSP52788 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.76■□□□□ 0.43
SMSP52788 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
SMSP52788 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMSP52788 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
SMSP52788 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.76■□□□□ 0.43
SMSP52788 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.76■□□□□ 0.43
SMSP52788 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.76■□□□□ 0.43
SMSP52788 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMSP52788 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMSP52788 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SMSP52788 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMSP52788 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMSP52788 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMSP52788 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMSP52788 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMSP52788 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMSP52788 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SMSP52788 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMSP52788 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMSP52788 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SMSP52788 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.75■□□□□ 0.43
SMSP52788 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
SMSP52788 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMSP52788 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMSP52788 RBM17P1-201ENST00000453646 1190 ntBASIC17.75■□□□□ 0.43
SMSP52788 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.75■□□□□ 0.43
SMSP52788 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.75■□□□□ 0.43
SMSP52788 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMSP52788 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SMSP52788 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMSP52788 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMSP52788 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SMSP52788 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMSP52788 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.75■□□□□ 0.43
SMSP52788 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMSP52788 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMSP52788 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMSP52788 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.75■□□□□ 0.43
SMSP52788 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.74■□□□□ 0.43
SMSP52788 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMSP52788 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMSP52788 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMSP52788 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SMSP52788 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.74■□□□□ 0.43
SMSP52788 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.74■□□□□ 0.43
SMSP52788 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMSP52788 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.74■□□□□ 0.43
SMSP52788 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.74■□□□□ 0.43
SMSP52788 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.74■□□□□ 0.43
SMSP52788 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMSP52788 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.74■□□□□ 0.43
SMSP52788 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.74■□□□□ 0.43
SMSP52788 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMSP52788 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SMSP52788 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.74■□□□□ 0.43
SMSP52788 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMSP52788 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SMSP52788 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMSP52788 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMSP52788 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMSP52788 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMSP52788 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMSP52788 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.73■□□□□ 0.43
SMSP52788 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMSP52788 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMSP52788 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
SMSP52788 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMSP52788 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMSP52788 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SMSP52788 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SMSP52788 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SMSP52788 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SMSP52788 NAPSB-206ENST00000562112 1266 ntBASIC17.73■□□□□ 0.43
SMSP52788 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.73■□□□□ 0.43
SMSP52788 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SMSP52788 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMSP52788 LINC01568-207ENST00000641790 1380 ntBASIC17.73■□□□□ 0.43
SMSP52788 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMSP52788 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.73■□□□□ 0.43
SMSP52788 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SMSP52788 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.73■□□□□ 0.43
SMSP52788 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.73■□□□□ 0.43
SMSP52788 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.73■□□□□ 0.43
SMSP52788 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMSP52788 KRT18P22-201ENST00000402024 1347 ntBASIC17.72■□□□□ 0.43
SMSP52788 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SMSP52788 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.72■□□□□ 0.43
SMSP52788 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SMSP52788 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMSP52788 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMSP52788 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMSP52788 NEFHP1-201ENST00000412845 2629 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms