Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL5P42830 AL390961.4-201ENST00000623958 2535 ntBASIC12.79□□□□□ -0.36
CXCL5P42830 RER1-204ENST00000378518 522 ntTSL 3 BASIC12.79□□□□□ -0.36
CXCL5P42830 GPX1P1-201ENST00000388829 606 ntBASIC12.79□□□□□ -0.36
CXCL5P42830 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC12.79□□□□□ -0.36
CXCL5P42830 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL5P42830 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC12.79□□□□□ -0.36
CXCL5P42830 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC12.79□□□□□ -0.36
CXCL5P42830 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL5P42830 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL5P42830 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CXCL5P42830 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC12.79□□□□□ -0.36
CXCL5P42830 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL5P42830 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL5P42830 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CXCL5P42830 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
CXCL5P42830 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CXCL5P42830 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CXCL5P42830 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL5P42830 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC12.79□□□□□ -0.36
CXCL5P42830 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC12.79□□□□□ -0.36
CXCL5P42830 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL5P42830 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CXCL5P42830 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC12.78□□□□□ -0.36
CXCL5P42830 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 KRT17P1-201ENST00000399211 1546 ntBASIC12.78□□□□□ -0.36
CXCL5P42830 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC12.78□□□□□ -0.36
CXCL5P42830 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 HACD1-201ENST00000326961 773 ntTSL 2 BASIC12.78□□□□□ -0.36
CXCL5P42830 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC12.78□□□□□ -0.36
CXCL5P42830 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC12.78□□□□□ -0.36
CXCL5P42830 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC12.78□□□□□ -0.36
CXCL5P42830 SERPINH1P1-201ENST00000419794 1249 ntBASIC12.78□□□□□ -0.36
CXCL5P42830 ZNRF2P3-201ENST00000424200 374 ntBASIC12.78□□□□□ -0.36
CXCL5P42830 YBX1P10-201ENST00000444752 975 ntBASIC12.78□□□□□ -0.36
CXCL5P42830 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
CXCL5P42830 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CXCL5P42830 AC011270.2-201ENST00000624293 2550 ntBASIC12.78□□□□□ -0.36
CXCL5P42830 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 CRK-204ENST00000574295 1391 ntTSL 5 BASIC12.78□□□□□ -0.36
CXCL5P42830 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CXCL5P42830 KRT8P8-201ENST00000434750 1448 ntBASIC12.78□□□□□ -0.36
CXCL5P42830 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC12.78□□□□□ -0.36
CXCL5P42830 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC12.78□□□□□ -0.36
CXCL5P42830 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
CXCL5P42830 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CXCL5P42830 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CXCL5P42830 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CXCL5P42830 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CXCL5P42830 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CXCL5P42830 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CXCL5P42830 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CXCL5P42830 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
CXCL5P42830 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CXCL5P42830 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
CXCL5P42830 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CXCL5P42830 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC12.77□□□□□ -0.36
CXCL5P42830 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CXCL5P42830 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CXCL5P42830 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CXCL5P42830 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CXCL5P42830 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC12.77□□□□□ -0.36
CXCL5P42830 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CXCL5P42830 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CXCL5P42830 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CXCL5P42830 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CXCL5P42830 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CXCL5P42830 GGT1-206ENST00000404223 952 ntTSL 2 BASIC12.77□□□□□ -0.37
CXCL5P42830 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
CXCL5P42830 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC12.77□□□□□ -0.37
CXCL5P42830 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC12.77□□□□□ -0.37
CXCL5P42830 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CXCL5P42830 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CXCL5P42830 AL121906.2-201ENST00000621597 723 ntBASIC12.77□□□□□ -0.37
CXCL5P42830 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC12.77□□□□□ -0.37
CXCL5P42830 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
CXCL5P42830 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC12.77□□□□□ -0.37
CXCL5P42830 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CXCL5P42830 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CXCL5P42830 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms