Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF4O60810 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF4O60810 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF4O60810 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF4O60810 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF4O60810 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF4O60810 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF4O60810 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
PRAMEF4O60810 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF4O60810 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF4O60810 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.25■□□□□ 0.51
PRAMEF4O60810 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.25■□□□□ 0.51
PRAMEF4O60810 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PRAMEF4O60810 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF4O60810 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.25■□□□□ 0.51
PRAMEF4O60810 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF4O60810 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF4O60810 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF4O60810 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF4O60810 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF4O60810 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF4O60810 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF4O60810 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.25■□□□□ 0.51
PRAMEF4O60810 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF4O60810 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
PRAMEF4O60810 FAM207BP-201ENST00000447172 505 ntBASIC18.25■□□□□ 0.51
PRAMEF4O60810 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.25■□□□□ 0.51
PRAMEF4O60810 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.25■□□□□ 0.51
PRAMEF4O60810 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PRAMEF4O60810 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PRAMEF4O60810 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.25■□□□□ 0.51
PRAMEF4O60810 FSCN1P1-201ENST00000568912 1481 ntBASIC18.25■□□□□ 0.51
PRAMEF4O60810 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
PRAMEF4O60810 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF4O60810 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF4O60810 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF4O60810 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF4O60810 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.24■□□□□ 0.51
PRAMEF4O60810 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF4O60810 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF4O60810 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF4O60810 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF4O60810 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.24■□□□□ 0.51
PRAMEF4O60810 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.24■□□□□ 0.51
PRAMEF4O60810 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.24■□□□□ 0.51
PRAMEF4O60810 AC008550.1-201ENST00000511500 884 ntBASIC18.24■□□□□ 0.51
PRAMEF4O60810 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.24■□□□□ 0.51
PRAMEF4O60810 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PRAMEF4O60810 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PRAMEF4O60810 REXO1L10P-201ENST00000615707 1290 ntBASIC18.24■□□□□ 0.51
PRAMEF4O60810 REXO1L12P-201ENST00000622156 912 ntBASIC18.24■□□□□ 0.51
PRAMEF4O60810 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.24■□□□□ 0.51
PRAMEF4O60810 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF4O60810 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF4O60810 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.24■□□□□ 0.51
PRAMEF4O60810 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF4O60810 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PRAMEF4O60810 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.24■□□□□ 0.51
PRAMEF4O60810 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF4O60810 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.24■□□□□ 0.51
PRAMEF4O60810 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
PRAMEF4O60810 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF4O60810 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PRAMEF4O60810 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEF4O60810 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF4O60810 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF4O60810 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF4O60810 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF4O60810 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PRAMEF4O60810 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF4O60810 Z98044.1-201ENST00000632503 1764 ntBASIC18.23■□□□□ 0.51
PRAMEF4O60810 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PRAMEF4O60810 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PRAMEF4O60810 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEF4O60810 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.23■□□□□ 0.51
PRAMEF4O60810 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEF4O60810 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEF4O60810 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEF4O60810 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.23■□□□□ 0.51
PRAMEF4O60810 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.23■□□□□ 0.51
PRAMEF4O60810 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.23■□□□□ 0.51
PRAMEF4O60810 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.23■□□□□ 0.51
PRAMEF4O60810 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PRAMEF4O60810 AC104581.1-202ENST00000635932 2618 ntBASIC18.23■□□□□ 0.51
PRAMEF4O60810 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF4O60810 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF4O60810 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF4O60810 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF4O60810 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
PRAMEF4O60810 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF4O60810 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF4O60810 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PRAMEF4O60810 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF4O60810 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF4O60810 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.23■□□□□ 0.51
PRAMEF4O60810 KRT8P3-201ENST00000519669 1449 ntBASIC18.23■□□□□ 0.51
PRAMEF4O60810 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.22■□□□□ 0.51
PRAMEF4O60810 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF4O60810 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF4O60810 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms