Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 BICD1-207ENST00000551848 1962 ntBASIC17.91■□□□□ 0.46
CLIC1O00299 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC1O00299 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC1O00299 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC1O00299 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC1O00299 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC1O00299 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC1O00299 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLIC1O00299 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC1O00299 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.9■□□□□ 0.46
CLIC1O00299 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC1O00299 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC1O00299 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC1O00299 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CLIC1O00299 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.9■□□□□ 0.46
CLIC1O00299 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC1O00299 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.9■□□□□ 0.46
CLIC1O00299 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC1O00299 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC1O00299 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.9■□□□□ 0.46
CLIC1O00299 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC1O00299 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC1O00299 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CLIC1O00299 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC1O00299 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC1O00299 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLIC1O00299 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC1O00299 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC1O00299 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC1O00299 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CLIC1O00299 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.9■□□□□ 0.46
CLIC1O00299 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.9■□□□□ 0.46
CLIC1O00299 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.9■□□□□ 0.46
CLIC1O00299 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLIC1O00299 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC1O00299 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.9■□□□□ 0.46
CLIC1O00299 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.9■□□□□ 0.46
CLIC1O00299 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC1O00299 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLIC1O00299 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC1O00299 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.9■□□□□ 0.46
CLIC1O00299 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC1O00299 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC1O00299 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC1O00299 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CLIC1O00299 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC1O00299 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.89■□□□□ 0.45
CLIC1O00299 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC1O00299 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.89■□□□□ 0.45
CLIC1O00299 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC1O00299 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.89■□□□□ 0.45
CLIC1O00299 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.89■□□□□ 0.45
CLIC1O00299 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.89■□□□□ 0.45
CLIC1O00299 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.89■□□□□ 0.45
CLIC1O00299 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC1O00299 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC1O00299 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.89■□□□□ 0.45
CLIC1O00299 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CLIC1O00299 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC1O00299 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.89■□□□□ 0.45
CLIC1O00299 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC1O00299 HLA-A-209ENST00000638375 975 ntBASIC17.89■□□□□ 0.45
CLIC1O00299 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
CLIC1O00299 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC1O00299 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC1O00299 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CLIC1O00299 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.89■□□□□ 0.45
CLIC1O00299 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC1O00299 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.89■□□□□ 0.45
CLIC1O00299 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLIC1O00299 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC1O00299 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC1O00299 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC1O00299 NBPF21P-201ENST00000425093 1451 ntBASIC17.88■□□□□ 0.45
CLIC1O00299 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC1O00299 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC1O00299 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC1O00299 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC1O00299 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC1O00299 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC1O00299 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC1O00299 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC1O00299 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC1O00299 TSPY23P-201ENST00000440136 739 ntBASIC17.88■□□□□ 0.45
CLIC1O00299 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.88■□□□□ 0.45
CLIC1O00299 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.88■□□□□ 0.45
CLIC1O00299 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.88■□□□□ 0.45
CLIC1O00299 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.88■□□□□ 0.45
CLIC1O00299 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.88■□□□□ 0.45
CLIC1O00299 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.88■□□□□ 0.45
CLIC1O00299 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC1O00299 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.88■□□□□ 0.45
CLIC1O00299 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC1O00299 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CLIC1O00299 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC1O00299 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC1O00299 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.88■□□□□ 0.45
CLIC1O00299 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC1O00299 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLIC1O00299 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms