Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 REST-206ENST00000612429 1376 ntTSL 5 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 REST-207ENST00000616975 1370 ntTSL 5 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 AC093484.2-201ENST00000580996 2166 ntBASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 EI24-211ENST00000534546 1544 ntTSL 2 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 AC067852.2-201ENST00000590513 2313 ntBASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 HES4-204ENST00000484667 667 ntTSL 3 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 AC007029.1-201ENST00000604183 313 ntBASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 Z82202.1-201ENST00000623446 1880 ntBASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 AC073957.3-201ENST00000609998 6758 ntBASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 AGPS-202ENST00000409888 815 ntTSL 4 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CHKB-CPT1BH3BT56 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms