Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDCP1Q9H5V8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDCP1Q9H5V8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDCP1Q9H5V8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 SLC25A1P2-201ENST00000430693 912 ntBASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 ATP5G1P1-201ENST00000448724 379 ntBASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 KRT8P11-201ENST00000409686 1436 ntBASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDCP1Q9H5V8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 AC010203.1-204ENST00000548782 407 ntBASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDCP1Q9H5V8 AC018445.3-201ENST00000624177 1945 ntBASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.68■□□□□ 0.42
CDCP1Q9H5V8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 SDHAP1-207ENST00000440850 2000 ntBASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 AC073508.3-201ENST00000619697 1419 ntBASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCP1Q9H5V8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms