Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 AC079776.4-201ENST00000511039 504 ntBASIC23.28■■□□□ 1.32
CNKSR1Q969H4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CNKSR1Q969H4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 Z83836.1-201ENST00000624605 1642 ntBASIC23.27■■□□□ 1.32
CNKSR1Q969H4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.27■■□□□ 1.32
CNKSR1Q969H4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CNKSR1Q969H4 AL512408.1-201ENST00000569378 2000 ntBASIC23.26■■□□□ 1.31
CNKSR1Q969H4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CNKSR1Q969H4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.26■■□□□ 1.31
CNKSR1Q969H4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.26■■□□□ 1.31
CNKSR1Q969H4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC23.26■■□□□ 1.31
CNKSR1Q969H4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC23.26■■□□□ 1.31
CNKSR1Q969H4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CNKSR1Q969H4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CNKSR1Q969H4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CNKSR1Q969H4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC23.26■■□□□ 1.31
CNKSR1Q969H4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC23.26■■□□□ 1.31
CNKSR1Q969H4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC23.26■■□□□ 1.31
CNKSR1Q969H4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CNKSR1Q969H4 SDHAP1-207ENST00000440850 2000 ntBASIC23.26■■□□□ 1.31
CNKSR1Q969H4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.26■■□□□ 1.31
CNKSR1Q969H4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC23.26■■□□□ 1.31
CNKSR1Q969H4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CNKSR1Q969H4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.26■■□□□ 1.31
CNKSR1Q969H4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CNKSR1Q969H4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CNKSR1Q969H4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 AC074051.2-201ENST00000565115 352 ntBASIC23.25■■□□□ 1.31
CNKSR1Q969H4 TK1-205ENST00000590862 642 ntTSL 3 BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC23.25■■□□□ 1.31
CNKSR1Q969H4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CNKSR1Q969H4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CNKSR1Q969H4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.24■■□□□ 1.31
CNKSR1Q969H4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC23.24■■□□□ 1.31
CNKSR1Q969H4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CNKSR1Q969H4 MRPL3P1-201ENST00000400109 1033 ntBASIC23.24■■□□□ 1.31
CNKSR1Q969H4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.24■■□□□ 1.31
CNKSR1Q969H4 KRT16P4-201ENST00000453883 522 ntBASIC23.24■■□□□ 1.31
CNKSR1Q969H4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC23.24■■□□□ 1.31
CNKSR1Q969H4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC23.24■■□□□ 1.31
CNKSR1Q969H4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC23.24■■□□□ 1.31
CNKSR1Q969H4 AC005332.3-201ENST00000589904 676 ntBASIC23.24■■□□□ 1.31
CNKSR1Q969H4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC23.24■■□□□ 1.31
CNKSR1Q969H4 AC138894.3-201ENST00000603787 634 ntBASIC23.24■■□□□ 1.31
CNKSR1Q969H4 AL353801.3-201ENST00000609898 542 ntBASIC23.24■■□□□ 1.31
CNKSR1Q969H4 IGHV3-41-201ENST00000613121 348 ntBASIC23.24■■□□□ 1.31
CNKSR1Q969H4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms