Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
PHTF2Q8N3S3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PHTF2Q8N3S3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHTF2Q8N3S3 AC004408.2-201ENST00000623613 2777 ntBASIC19.64■□□□□ 0.73
PHTF2Q8N3S3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHTF2Q8N3S3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.64■□□□□ 0.73
PHTF2Q8N3S3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.64■□□□□ 0.73
PHTF2Q8N3S3 YBX1P2-201ENST00000489612 999 ntBASIC19.64■□□□□ 0.73
PHTF2Q8N3S3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHTF2Q8N3S3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.64■□□□□ 0.73
PHTF2Q8N3S3 AC141257.4-201ENST00000634557 245 ntBASIC19.64■□□□□ 0.73
PHTF2Q8N3S3 AC136944.6-201ENST00000634818 245 ntBASIC19.64■□□□□ 0.73
PHTF2Q8N3S3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.64■□□□□ 0.73
PHTF2Q8N3S3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHTF2Q8N3S3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHTF2Q8N3S3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
PHTF2Q8N3S3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.64■□□□□ 0.73
PHTF2Q8N3S3 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.64■□□□□ 0.73
PHTF2Q8N3S3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.64■□□□□ 0.73
PHTF2Q8N3S3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.64■□□□□ 0.73
PHTF2Q8N3S3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
PHTF2Q8N3S3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 KRT8P11-201ENST00000409686 1436 ntBASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 RNF152P1-201ENST00000397754 604 ntBASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PHTF2Q8N3S3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 COX11P1-201ENST00000489116 835 ntBASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 AC005332.7-201ENST00000614046 2005 ntBASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.62■□□□□ 0.73
PHTF2Q8N3S3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 AP003041.3-201ENST00000527151 707 ntBASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.61■□□□□ 0.73
PHTF2Q8N3S3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHTF2Q8N3S3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHTF2Q8N3S3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHTF2Q8N3S3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.6■□□□□ 0.73
PHTF2Q8N3S3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.6■□□□□ 0.73
PHTF2Q8N3S3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms