Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC113347.1-201ENST00000413321 391 ntBASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 ECEL1P2-202ENST00000465689 757 ntBASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 AC005521.1-201ENST00000393351 872 ntBASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 RCN1P1-201ENST00000400413 996 ntBASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 TMPOP1-202ENST00000424642 1267 ntBASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 KRT8P11-201ENST00000409686 1436 ntBASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRIM48Q8IWZ4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 SDHAP1-207ENST00000440850 2000 ntBASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM48Q8IWZ4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 TSPY21P-201ENST00000433481 731 ntBASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 KRT18P57-201ENST00000443599 1254 ntBASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 RN7SL850P-201ENST00000579959 291 ntBASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 AC092865.7-201ENST00000641832 219 ntBASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIM48Q8IWZ4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 TREX1-205ENST00000625293 1783 ntBASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms