Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.51■□□□□ 0.39
TUBA1AQ71U36 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 POU5F1P3-201ENST00000428824 1078 ntBASIC17.5■□□□□ 0.39
TUBA1AQ71U36 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 AC008403.3-201ENST00000598924 454 ntBASIC17.5■□□□□ 0.39
TUBA1AQ71U36 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA1AQ71U36 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 AC124283.5-201ENST00000624661 1809 ntBASIC17.49■□□□□ 0.39
TUBA1AQ71U36 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 KRT8P17-201ENST00000453110 1448 ntBASIC17.49■□□□□ 0.39
TUBA1AQ71U36 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 AL031598.1-201ENST00000561511 1773 ntBASIC17.49■□□□□ 0.39
TUBA1AQ71U36 Z98044.1-201ENST00000632503 1764 ntBASIC17.49■□□□□ 0.39
TUBA1AQ71U36 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 AC026366.1-201ENST00000488803 879 ntBASIC17.49■□□□□ 0.39
TUBA1AQ71U36 UNC93B4-201ENST00000505679 747 ntBASIC17.49■□□□□ 0.39
TUBA1AQ71U36 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 AL031963.3-201ENST00000606441 850 ntBASIC17.49■□□□□ 0.39
TUBA1AQ71U36 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TUBA1AQ71U36 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TUBA1AQ71U36 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.48■□□□□ 0.39
TUBA1AQ71U36 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TUBA1AQ71U36 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.48■□□□□ 0.39
TUBA1AQ71U36 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TUBA1AQ71U36 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
TUBA1AQ71U36 KRT8P20-201ENST00000423953 1409 ntBASIC17.48■□□□□ 0.39
TUBA1AQ71U36 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.48■□□□□ 0.39
TUBA1AQ71U36 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TUBA1AQ71U36 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TUBA1AQ71U36 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TUBA1AQ71U36 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TUBA1AQ71U36 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.48■□□□□ 0.39
TUBA1AQ71U36 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TUBA1AQ71U36 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TUBA1AQ71U36 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TUBA1AQ71U36 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.48■□□□□ 0.39
TUBA1AQ71U36 AC023632.3-201ENST00000521633 145 ntBASIC17.48■□□□□ 0.39
TUBA1AQ71U36 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TUBA1AQ71U36 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.48■□□□□ 0.39
TUBA1AQ71U36 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TUBA1AQ71U36 AC006058.3-201ENST00000606217 1069 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms