Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC9.97□□□□□ -0.812e-12■■□□□ 12
SRSF1Q07955 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.2□□□□□ -0.38e-9■■□□□ 12
SRSF1Q07955 EWSR1-217ENST00000483415 3231 ntTSL 1 (best)8.95□□□□□ -0.988e-9■■□□□ 12
SRSF1Q07955 EWSR1-211ENST00000437155 933 ntTSL 58.4□□□□□ -1.068e-9■■□□□ 12
SRSF1Q07955 EWSR1-214ENST00000455726 710 ntTSL 36.59□□□□□ -1.358e-9■■□□□ 12
SRSF1Q07955 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.625e-10■■□□□ 11.9
SRSF1Q07955 PRRC2B-202ENST00000357304 11042 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.932e-8■■□□□ 11.9
SRSF1Q07955 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC8.81□□□□□ -12e-8■■□□□ 11.9
SRSF1Q07955 LARP4B-202ENST00000406525 681 ntTSL 525.3■■□□□ 1.641e-6■■□□□ 11.9
SRSF1Q07955 RAPH1-206ENST00000420371 492 ntTSL 323.17■■□□□ 1.31e-6■■□□□ 11.9
SRSF1Q07955 RAPH1-212ENST00000465669 360 ntTSL 221.26■□□□□ 0.991e-6■■□□□ 11.9
SRSF1Q07955 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.981e-6■■□□□ 11.9
SRSF1Q07955 AL355987.4-202ENST00000459985 1900 ntTSL 218.69■□□□□ 0.581e-6■■□□□ 11.9
SRSF1Q07955 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.22■□□□□ 0.351e-6■■□□□ 11.9
SRSF1Q07955 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.191e-6■■□□□ 11.9
SRSF1Q07955 LRP8-209ENST00000480045 3231 ntTSL 515.65■□□□□ 0.11e-6■■□□□ 11.9
SRSF1Q07955 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.071e-6■■□□□ 11.9
SRSF1Q07955 SCRIB-205ENST00000526832 2189 ntTSL 1 (best)14.63□□□□□ -0.071e-6■■□□□ 11.9
SRSF1Q07955 NCAPH2-206ENST00000518394 720 ntTSL 514.51□□□□□ -0.091e-6■■□□□ 11.9
SRSF1Q07955 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.121e-6■■□□□ 11.9
SRSF1Q07955 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.141e-6■■□□□ 11.9
SRSF1Q07955 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.141e-6■■□□□ 11.9
SRSF1Q07955 LARP4B-207ENST00000476529 613 ntTSL 314.11□□□□□ -0.151e-6■■□□□ 11.9
SRSF1Q07955 CCAR2-209ENST00000521436 1840 ntTSL 514.09□□□□□ -0.151e-6■■□□□ 11.9
SRSF1Q07955 CCAR2-204ENST00000520536 2173 ntTSL 214.01□□□□□ -0.171e-6■■□□□ 11.9
SRSF1Q07955 LARP4B-208ENST00000481118 421 ntTSL 313.56□□□□□ -0.241e-6■■□□□ 11.9
SRSF1Q07955 NCAPH2-204ENST00000418794 640 ntTSL 513.46□□□□□ -0.251e-6■■□□□ 11.9
SRSF1Q07955 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.76□□□□□ -0.371e-6■■□□□ 11.9
SRSF1Q07955 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.411e-6■■□□□ 11.9
SRSF1Q07955 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.44□□□□□ -0.421e-6■■□□□ 11.9
SRSF1Q07955 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.461e-6■■□□□ 11.9
SRSF1Q07955 AHSA2-210ENST00000493310 402 ntTSL 212.1□□□□□ -0.471e-6■■□□□ 11.9
SRSF1Q07955 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.481e-6■■□□□ 11.9
SRSF1Q07955 CCAR2-205ENST00000520738 2633 ntTSL 212□□□□□ -0.491e-6■■□□□ 11.9
SRSF1Q07955 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.511e-6■■□□□ 11.9
SRSF1Q07955 LRP8-211ENST00000496580 507 ntTSL 211.58□□□□□ -0.561e-6■■□□□ 11.9
SRSF1Q07955 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC10.91□□□□□ -0.661e-6■■□□□ 11.9
SRSF1Q07955 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.661e-6■■□□□ 11.9
SRSF1Q07955 CCAR2-206ENST00000520861 3560 ntTSL 1 (best) BASIC9.74□□□□□ -0.851e-6■■□□□ 11.9
SRSF1Q07955 LARP4B-201ENST00000316157 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.91e-6■■□□□ 11.9
SRSF1Q07955 AHSA2-211ENST00000493628 633 ntTSL 35.56□□□□□ -1.521e-6■■□□□ 11.9
SRSF1Q07955 AHSA2-207ENST00000487904 505 ntTSL 35.13□□□□□ -1.591e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-204ENST00000422442 564 ntTSL 519.75■□□□□ 0.751e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-201ENST00000352800 611 ntTSL 519.51■□□□□ 0.711e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-219ENST00000627825 312 ntTSL 518.22■□□□□ 0.511e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-217ENST00000626672 568 ntTSL 418.17■□□□□ 0.51e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-202ENST00000413084 592 ntTSL 418.17■□□□□ 0.51e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-203ENST00000422066 604 ntTSL 417.57■□□□□ 0.41e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-209ENST00000431421 550 ntTSL 417.57■□□□□ 0.41e-6■■□□□ 11.9
SRSF1Q07955 CCNL1-207ENST00000465947 793 ntTSL 516.47■□□□□ 0.231e-6■■□□□ 11.9
SRSF1Q07955 CC2D1A-202ENST00000585896 1843 ntTSL 216.15■□□□□ 0.181e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-225ENST00000636187 171 ntTSL 515.79■□□□□ 0.121e-6■■□□□ 11.9
SRSF1Q07955 CCNL1-208ENST00000466101 911 ntTSL 215.52■□□□□ 0.081e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-206ENST00000427349 554 ntTSL 315.29■□□□□ 0.041e-6■■□□□ 11.9
SRSF1Q07955 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.87□□□□□ -0.031e-6■■□□□ 11.9
SRSF1Q07955 CCNL1-222ENST00000479596 883 ntTSL 314.32□□□□□ -0.121e-6■■□□□ 11.9
SRSF1Q07955 ALG13-227ENST00000622997 594 ntTSL 514.14□□□□□ -0.151e-6■■□□□ 11.9
SRSF1Q07955 ALG13-213ENST00000482374 679 ntTSL 214.14□□□□□ -0.151e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-210ENST00000431674 559 ntTSL 414.12□□□□□ -0.151e-6■■□□□ 11.9
SRSF1Q07955 ALG13-207ENST00000468657 916 ntTSL 213.9□□□□□ -0.181e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-213ENST00000450267 588 ntTSL 313.48□□□□□ -0.251e-6■■□□□ 11.9
SRSF1Q07955 CC2D1A-206ENST00000589138 2435 ntTSL 513.07□□□□□ -0.321e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-207ENST00000428970 575 ntTSL 412.67□□□□□ -0.381e-6■■□□□ 11.9
SRSF1Q07955 CC2D1A-203ENST00000586955 2743 ntTSL 1 (best)12.61□□□□□ -0.391e-6■■□□□ 11.9
SRSF1Q07955 ALG13-210ENST00000471924 711 ntTSL 312.58□□□□□ -0.41e-6■■□□□ 11.9
SRSF1Q07955 CCNL1-213ENST00000471044 753 ntTSL 212.1□□□□□ -0.471e-6■■□□□ 11.9
SRSF1Q07955 ALG13-220ENST00000489033 785 ntTSL 311.73□□□□□ -0.531e-6■■□□□ 11.9
SRSF1Q07955 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.691e-6■■□□□ 11.9
SRSF1Q07955 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.711e-6■■□□□ 11.9
SRSF1Q07955 CC2D1A-209ENST00000589679 610 ntTSL 310.49□□□□□ -0.731e-6■■□□□ 11.9
SRSF1Q07955 NCOA4-203ENST00000580070 1755 ntTSL 2 BASIC10.3□□□□□ -0.761e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-214ENST00000457928 4101 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.051e-6■■□□□ 11.9
SRSF1Q07955 NCOA4-202ENST00000579039 2211 ntTSL 2 BASIC8.24□□□□□ -1.091e-6■■□□□ 11.9
SRSF1Q07955 ALG13-223ENST00000495283 3236 ntTSL 28.17□□□□□ -1.11e-6■■□□□ 11.9
SRSF1Q07955 ALG13-226ENST00000622986 582 ntTSL 2 BASIC8.13□□□□□ -1.111e-6■■□□□ 11.9
SRSF1Q07955 ALG13-216ENST00000486353 916 ntTSL 57.99□□□□□ -1.131e-6■■□□□ 11.9
SRSF1Q07955 NDUFV2-206ENST00000483511 335 ntTSL 57.9□□□□□ -1.141e-6■■□□□ 11.9
SRSF1Q07955 ALG13-225ENST00000621367 3893 ntTSL 2 BASIC7.83□□□□□ -1.161e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-211ENST00000437738 565 ntTSL 57.66□□□□□ -1.181e-6■■□□□ 11.9
SRSF1Q07955 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC7.49□□□□□ -1.211e-6■■□□□ 11.9
SRSF1Q07955 ALG13-228ENST00000623144 3693 ntTSL 27.29□□□□□ -1.241e-6■■□□□ 11.9
SRSF1Q07955 ALG13-214ENST00000482742 620 ntTSL 2 BASIC7.26□□□□□ -1.251e-6■■□□□ 11.9
SRSF1Q07955 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.261e-6■■□□□ 11.9
SRSF1Q07955 ALG13-204ENST00000436609 3812 ntTSL 5 BASIC7.13□□□□□ -1.271e-6■■□□□ 11.9
SRSF1Q07955 ALG13-229ENST00000623148 3689 ntTSL 27.08□□□□□ -1.281e-6■■□□□ 11.9
SRSF1Q07955 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC7.06□□□□□ -1.281e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-231ENST00000637137 107 ntTSL 56.95□□□□□ -1.31e-6■■□□□ 11.9
SRSF1Q07955 ALG13-222ENST00000492038 1098 ntTSL 36.89□□□□□ -1.311e-6■■□□□ 11.9
SRSF1Q07955 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.85□□□□□ -1.311e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-220ENST00000630796 656 ntTSL 56.84□□□□□ -1.311e-6■■□□□ 11.9
SRSF1Q07955 NDUFV2-204ENST00000474350 632 ntTSL 36.71□□□□□ -1.341e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-221ENST00000630833 567 ntTSL 46.41□□□□□ -1.381e-6■■□□□ 11.9
SRSF1Q07955 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC6.32□□□□□ -1.41e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-205ENST00000424913 592 ntTSL 46.26□□□□□ -1.411e-6■■□□□ 11.9
SRSF1Q07955 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.461e-6■■□□□ 11.9
SRSF1Q07955 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC5.9□□□□□ -1.471e-6■■□□□ 11.9
SRSF1Q07955 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC5.86□□□□□ -1.471e-6■■□□□ 11.9
SRSF1Q07955 YTHDC1-204ENST00000506175 581 ntTSL 35.72□□□□□ -1.491e-6■■□□□ 11.9
SRSF1Q07955 TBL1XR1-224ENST00000635794 768 ntTSL 55.57□□□□□ -1.521e-6■■□□□ 11.9
SRSF1Q07955 ALG13-218ENST00000487141 745 ntTSL 55.29□□□□□ -1.561e-6■■□□□ 11.9
Retrieved 100 of 14,836 protein–RNA pairs in 123.9 ms