RNA–Protein interactions for RNA: ENST00000526832.5

SCRIB-205, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 1 (best)

Gene SCRIB, Length 2,189 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-205ENST00000526832 NISCHQ9Y2I1 1504 aa38.57■■■■□ 3.77
SCRIB-205ENST00000526832 CCDC180Q9P1Z9 1646 aa33.38■■■□□ 2.93
SCRIB-205ENST00000526832 ZCCHC6Q5VYS8 1495 aaKnown RBP32.49■■■□□ 2.79
SCRIB-205ENST00000526832 ABCC9O60706 1549 aa32.4■■■□□ 2.78
SCRIB-205ENST00000526832 SHROOM4Q9ULL8 1493 aa32.14■■■□□ 2.74
SCRIB-205ENST00000526832 DCAF8L2P0C7V8 631 aa31.9■■■□□ 2.7
SCRIB-205ENST00000526832 DCAF1Q9Y4B6 1507 aa31.78■■■□□ 2.68
SCRIB-205ENST00000526832 SUPT5HO00267 1087 aaKnown RBP31.73■■■□□ 2.67
SCRIB-205ENST00000526832 CHIC1Q5VXU3 224 aa31.33■■■□□ 2.61
SCRIB-205ENST00000526832 MYO15BQ96JP2 1530 aa31.25■■■□□ 2.59
SCRIB-205ENST00000526832 HRCP23327 699 aa31.12■■■□□ 2.57
SCRIB-205ENST00000526832 RB1CC1Q8TDY2 1594 aa31.11■■■□□ 2.57
SCRIB-205ENST00000526832 NACADO15069 1562 aa31.1■■■□□ 2.57
SCRIB-205ENST00000526832 SCRIBQ14160 1630 aa30.93■■■□□ 2.54
SCRIB-205ENST00000526832 PCGF6Q9BYE7 350 aa30.5■■■□□ 2.47
SCRIB-205ENST00000526832 UNC13AQ9UPW8 1703 aa30.49■■■□□ 2.47
SCRIB-205ENST00000526832 PABPN1Q86U42 306 aaKnown RBP eCLIP30.48■■■□□ 2.474e-7■■□□□ 14.5
SCRIB-205ENST00000526832 BICRAQ9NZM4 1560 aa30.22■■■□□ 2.43
SCRIB-205ENST00000526832 RSF1Q96T23 1441 aaPredicted RBP30.21■■■□□ 2.43
SCRIB-205ENST00000526832 TRIM26Q12899 539 aaPredicted RBP30.14■■■□□ 2.42
SCRIB-205ENST00000526832 LOC105371045A0A1W2PR82 267 aa30.14■■■□□ 2.41
SCRIB-205ENST00000526832 CECR2Q9BXF3 1484 aa30.02■■■□□ 2.4
SCRIB-205ENST00000526832 PPARGC1BQ86YN6 1023 aaKnown RBP30.01■■■□□ 2.39
SCRIB-205ENST00000526832 MROH2BQ7Z745 1585 aa29.88■■■□□ 2.37
SCRIB-205ENST00000526832 ZEB1P37275 1124 aaPredicted RBP29.84■■■□□ 2.37
SCRIB-205ENST00000526832 BAZ1AQ9NRL2 1556 aaPredicted RBP29.74■■■□□ 2.35
SCRIB-205ENST00000526832 TRIM41Q8WV44 630 aa29.73■■■□□ 2.35
SCRIB-205ENST00000526832 WIZO95785 1651 aa29.7■■■□□ 2.34
SCRIB-205ENST00000526832 SMARCA4P51532 1647 aa29.59■■■□□ 2.33
SCRIB-205ENST00000526832 PELP1Q8IZL8 1130 aaKnown RBP29.54■■■□□ 2.32
SCRIB-205ENST00000526832 DNAJC5BQ9UF47 199 aa29.49■■■□□ 2.31
SCRIB-205ENST00000526832 EIF4G1Q04637 1599 aaKnown RBP29.38■■■□□ 2.29
SCRIB-205ENST00000526832 TOP2AP11388 1531 aaKnown RBP29.31■■■□□ 2.28
SCRIB-205ENST00000526832 FAM9AQ8IZU1 332 aaPredicted RBP29.22■■■□□ 2.27
SCRIB-205ENST00000526832 CC2D2AQ9P2K1 1620 aa29.22■■■□□ 2.27
SCRIB-205ENST00000526832 PEG3Q9GZU2 1588 aa29.13■■■□□ 2.25
SCRIB-205ENST00000526832 SMARCA2P51531 1590 aa29.09■■■□□ 2.25
SCRIB-205ENST00000526832 CCDC88BA6NC98 1476 aa29.06■■■□□ 2.24
SCRIB-205ENST00000526832 WRNQ14191 1432 aaPredicted RBP eCLIP29.03■■■□□ 2.24
SCRIB-205ENST00000526832 ATAD2BQ9ULI0 1458 aa28.97■■■□□ 2.23
SCRIB-205ENST00000526832 EHMT2Q96KQ7 1210 aa28.95■■■□□ 2.22
SCRIB-205ENST00000526832 SCAF1Q9H7N4 1312 aaKnown RBP28.92■■■□□ 2.22
SCRIB-205ENST00000526832 EEA1Q15075 1411 aa28.87■■■□□ 2.21
SCRIB-205ENST00000526832 BAZ1BQ9UIG0 1483 aaKnown RBP28.87■■■□□ 2.21
SCRIB-205ENST00000526832 TNIKQ9UKE5 1360 aa28.76■■■□□ 2.19
SCRIB-205ENST00000526832 NCAPD3P42695 1498 aa28.71■■■□□ 2.19
SCRIB-205ENST00000526832 ABCC8Q09428 1581 aa28.71■■■□□ 2.19
SCRIB-205ENST00000526832 CEP162Q5TB80 1403 aa28.7■■■□□ 2.18
SCRIB-205ENST00000526832 CCER1Q8TC90 406 aaPredicted RBP28.61■■■□□ 2.17
SCRIB-205ENST00000526832 HMGXB3Q12766 1538 aa28.61■■■□□ 2.17
SCRIB-205ENST00000526832 ACIN1Q9UKV3 1341 aaKnown RBP28.57■■■□□ 2.16
SCRIB-205ENST00000526832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.55■■■□□ 2.16
SCRIB-205ENST00000526832 SOGA1O94964 1423 aa28.53■■■□□ 2.16
SCRIB-205ENST00000526832 GOLGA3Q08378 1498 aa28.5■■■□□ 2.15
SCRIB-205ENST00000526832 CSRNP3Q8WYN3 585 aa28.48■■■□□ 2.15
SCRIB-205ENST00000526832 CENPBP07199 599 aaPredicted RBP28.41■■■□□ 2.14
SCRIB-205ENST00000526832 KIF21BO75037 1637 aa28.39■■■□□ 2.13
SCRIB-205ENST00000526832 MYT1Q01538 1121 aa28.38■■■□□ 2.13
SCRIB-205ENST00000526832 DIEXFQ68CQ4 756 aaKnown RBP28.33■■■□□ 2.13
SCRIB-205ENST00000526832 CEP164Q9UPV0 1460 aa28.33■■■□□ 2.13
SCRIB-205ENST00000526832 NEUROD1Q13562 356 aa28.32■■■□□ 2.12
SCRIB-205ENST00000526832 RUSC2Q8N2Y8 1516 aa28.32■■■□□ 2.12
SCRIB-205ENST00000526832 SYNJ1O43426 1573 aa28.26■■■□□ 2.11
SCRIB-205ENST00000526832 NESP48681 1621 aa28.21■■■□□ 2.11
SCRIB-205ENST00000526832 UBTFP17480 764 aaKnown RBP28.19■■■□□ 2.1
SCRIB-205ENST00000526832 ZNF316A6NFI3 1004 aaPredicted RBP28.12■■■□□ 2.09
SCRIB-205ENST00000526832 GTF3C3Q9Y5Q9 886 aa28.12■■■□□ 2.09
SCRIB-205ENST00000526832 CFTRP13569 1480 aa28.12■■■□□ 2.09
SCRIB-205ENST00000526832 TTBK1Q5TCY1 1321 aaPredicted RBP28.11■■■□□ 2.09
SCRIB-205ENST00000526832 VPS8Q8N3P4 1428 aa28.11■■■□□ 2.09
SCRIB-205ENST00000526832 CLIP1P30622 1438 aa28.09■■■□□ 2.09
SCRIB-205ENST00000526832 TOP2BQ02880 1626 aa28.05■■■□□ 2.08
SCRIB-205ENST00000526832 PRDM2Q13029 1718 aa28.03■■■□□ 2.08
SCRIB-205ENST00000526832 BIVM-ERCC5R4GMW8 1640 aa28■■■□□ 2.07
SCRIB-205ENST00000526832 CADPSQ9ULU8 1353 aa27.98■■■□□ 2.07
SCRIB-205ENST00000526832 LAMC3Q9Y6N6 1575 aa27.93■■■□□ 2.06
SCRIB-205ENST00000526832 ERICH3Q5RHP9 1530 aa27.91■■■□□ 2.06
SCRIB-205ENST00000526832 CUX1P39880 1505 aa27.9■■■□□ 2.06
SCRIB-205ENST00000526832 RAPGEF2Q9Y4G8 1499 aa27.89■■■□□ 2.06
SCRIB-205ENST00000526832 CLSPNQ9HAW4 1339 aa27.88■■■□□ 2.05
SCRIB-205ENST00000526832 ERCC6Q03468 1493 aa27.82■■■□□ 2.04
SCRIB-205ENST00000526832 PRXQ9BXM0 1461 aa27.78■■■□□ 2.04
SCRIB-205ENST00000526832 APLP2Q06481 763 aa27.75■■■□□ 2.03
SCRIB-205ENST00000526832 KIF21AQ7Z4S6 1674 aa27.75■■■□□ 2.03
SCRIB-205ENST00000526832 PDS5BQ9NTI5 1447 aa27.73■■■□□ 2.03
SCRIB-205ENST00000526832 FANCD2Q9BXW9 1451 aa27.72■■■□□ 2.03
SCRIB-205ENST00000526832 HNRNPUL2Q1KMD3 747 aaKnown RBP27.69■■■□□ 2.02
SCRIB-205ENST00000526832 ARAP1Q96P48 1450 aa27.64■■■□□ 2.01
SCRIB-205ENST00000526832 CUX2O14529 1486 aa27.61■■■□□ 2.01
SCRIB-205ENST00000526832 MIER1Q8N108 512 aa27.6■■■□□ 2.01
SCRIB-205ENST00000526832 RRBP1Q9P2E9 1410 aaKnown RBP27.58■■■□□ 2.01
SCRIB-205ENST00000526832 KIF27Q86VH2 1401 aa27.57■■■□□ 2
SCRIB-205ENST00000526832 DHX57Q6P158 1386 aaKnown RBP27.55■■■□□ 2
SCRIB-205ENST00000526832 FGD5Q6ZNL6 1462 aa27.54■■■□□ 2
SCRIB-205ENST00000526832 THOC2Q8NI27 1593 aaKnown RBP27.53■■■□□ 2
SCRIB-205ENST00000526832 DNMBPQ6XZF7 1577 aa27.48■■□□□ 1.99
SCRIB-205ENST00000526832 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
SCRIB-205ENST00000526832 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
SCRIB-205ENST00000526832 YTHDC1Q96MU7 727 aaKnown RBP27.44■■□□□ 1.98
SCRIB-205ENST00000526832 TOPBP1Q92547 1522 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms