Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 GPX1P1-201ENST00000388829 606 ntBASIC16.55■□□□□ 0.24
GDNFP39905 TSPY6P-201ENST00000448518 926 ntBASIC16.55■□□□□ 0.24
GDNFP39905 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.55■□□□□ 0.24
GDNFP39905 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.55■□□□□ 0.24
GDNFP39905 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.55■□□□□ 0.24
GDNFP39905 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.55■□□□□ 0.24
GDNFP39905 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GDNFP39905 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
GDNFP39905 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.55■□□□□ 0.24
GDNFP39905 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
GDNFP39905 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDNFP39905 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.55■□□□□ 0.24
GDNFP39905 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.55■□□□□ 0.24
GDNFP39905 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDNFP39905 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.55■□□□□ 0.24
GDNFP39905 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GDNFP39905 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.54■□□□□ 0.24
GDNFP39905 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.54■□□□□ 0.24
GDNFP39905 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GDNFP39905 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.54■□□□□ 0.24
GDNFP39905 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GDNFP39905 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
GDNFP39905 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.54■□□□□ 0.24
GDNFP39905 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GDNFP39905 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
GDNFP39905 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.54■□□□□ 0.24
GDNFP39905 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.54■□□□□ 0.24
GDNFP39905 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.54■□□□□ 0.24
GDNFP39905 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.54■□□□□ 0.24
GDNFP39905 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.54■□□□□ 0.24
GDNFP39905 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.54■□□□□ 0.24
GDNFP39905 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GDNFP39905 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GDNFP39905 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
GDNFP39905 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
GDNFP39905 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GDNFP39905 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.54■□□□□ 0.24
GDNFP39905 ABALON-201ENST00000629058 1903 ntBASIC16.54■□□□□ 0.24
GDNFP39905 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GDNFP39905 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GDNFP39905 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GDNFP39905 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
GDNFP39905 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
GDNFP39905 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.54■□□□□ 0.24
GDNFP39905 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
GDNFP39905 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDNFP39905 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GDNFP39905 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
GDNFP39905 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDNFP39905 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
GDNFP39905 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
GDNFP39905 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
GDNFP39905 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.53■□□□□ 0.24
GDNFP39905 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
GDNFP39905 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDNFP39905 AC098934.4-201ENST00000564127 592 ntBASIC16.53■□□□□ 0.24
GDNFP39905 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.53■□□□□ 0.24
GDNFP39905 C2orf69P4-201ENST00000565394 541 ntBASIC16.53■□□□□ 0.24
GDNFP39905 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.53■□□□□ 0.24
GDNFP39905 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.53■□□□□ 0.24
GDNFP39905 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.53■□□□□ 0.24
GDNFP39905 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDNFP39905 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDNFP39905 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDNFP39905 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
GDNFP39905 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
GDNFP39905 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDNFP39905 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDNFP39905 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDNFP39905 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.53■□□□□ 0.24
GDNFP39905 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDNFP39905 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDNFP39905 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDNFP39905 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDNFP39905 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.52■□□□□ 0.24
GDNFP39905 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.52■□□□□ 0.24
GDNFP39905 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
GDNFP39905 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.52■□□□□ 0.24
GDNFP39905 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GDNFP39905 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GDNFP39905 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GDNFP39905 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.52■□□□□ 0.24
GDNFP39905 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GDNFP39905 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GDNFP39905 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.52■□□□□ 0.24
GDNFP39905 AL138781.1-201ENST00000566567 1274 ntBASIC16.52■□□□□ 0.24
GDNFP39905 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.52■□□□□ 0.24
GDNFP39905 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
GDNFP39905 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GDNFP39905 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
GDNFP39905 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GDNFP39905 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
GDNFP39905 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
GDNFP39905 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
GDNFP39905 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
GDNFP39905 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GDNFP39905 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.52■□□□□ 0.23
GDNFP39905 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
GDNFP39905 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.52■□□□□ 0.23
GDNFP39905 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms