Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCNN1AP37088 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
SCNN1AP37088 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SCNN1AP37088 AC098818.2-201ENST00000564925 2320 ntBASIC19.79■□□□□ 0.76
SCNN1AP37088 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCNN1AP37088 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.79■□□□□ 0.76
SCNN1AP37088 AL023803.3-201ENST00000615559 522 ntBASIC19.79■□□□□ 0.76
SCNN1AP37088 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCNN1AP37088 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.79■□□□□ 0.76
SCNN1AP37088 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCNN1AP37088 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCNN1AP37088 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCNN1AP37088 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCNN1AP37088 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SCNN1AP37088 HEIH-201ENST00000623091 1652 ntBASIC19.78■□□□□ 0.76
SCNN1AP37088 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.78■□□□□ 0.76
SCNN1AP37088 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.78■□□□□ 0.76
SCNN1AP37088 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCNN1AP37088 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
SCNN1AP37088 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SCNN1AP37088 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCNN1AP37088 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCNN1AP37088 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCNN1AP37088 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCNN1AP37088 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.78■□□□□ 0.76
SCNN1AP37088 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.78■□□□□ 0.76
SCNN1AP37088 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.78■□□□□ 0.76
SCNN1AP37088 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCNN1AP37088 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.78■□□□□ 0.76
SCNN1AP37088 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCNN1AP37088 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCNN1AP37088 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.78■□□□□ 0.76
SCNN1AP37088 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCNN1AP37088 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SCNN1AP37088 CROCCP3-202ENST00000420820 1947 ntBASIC19.78■□□□□ 0.76
SCNN1AP37088 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCNN1AP37088 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCNN1AP37088 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCNN1AP37088 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.78■□□□□ 0.76
SCNN1AP37088 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCNN1AP37088 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.77■□□□□ 0.76
SCNN1AP37088 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCNN1AP37088 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCNN1AP37088 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.77■□□□□ 0.76
SCNN1AP37088 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SCNN1AP37088 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCNN1AP37088 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.77■□□□□ 0.76
SCNN1AP37088 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.77■□□□□ 0.76
SCNN1AP37088 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
SCNN1AP37088 MIR1238-201ENST00000408483 83 ntBASIC19.77■□□□□ 0.76
SCNN1AP37088 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.77■□□□□ 0.76
SCNN1AP37088 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.77■□□□□ 0.76
SCNN1AP37088 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCNN1AP37088 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.77■□□□□ 0.76
SCNN1AP37088 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCNN1AP37088 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCNN1AP37088 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCNN1AP37088 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCNN1AP37088 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.77■□□□□ 0.76
SCNN1AP37088 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCNN1AP37088 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.76■□□□□ 0.75
SCNN1AP37088 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCNN1AP37088 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SCNN1AP37088 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCNN1AP37088 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.76■□□□□ 0.75
SCNN1AP37088 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCNN1AP37088 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCNN1AP37088 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SCNN1AP37088 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.76■□□□□ 0.75
SCNN1AP37088 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCNN1AP37088 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.76■□□□□ 0.75
SCNN1AP37088 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.76■□□□□ 0.75
SCNN1AP37088 TSPY17P-201ENST00000450329 467 ntBASIC19.76■□□□□ 0.75
SCNN1AP37088 TSPY15P-201ENST00000457163 923 ntBASIC19.76■□□□□ 0.75
SCNN1AP37088 C2orf69P3-201ENST00000565542 1120 ntBASIC19.76■□□□□ 0.75
SCNN1AP37088 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SCNN1AP37088 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCNN1AP37088 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCNN1AP37088 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.76■□□□□ 0.75
SCNN1AP37088 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SCNN1AP37088 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.76■□□□□ 0.75
SCNN1AP37088 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCNN1AP37088 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCNN1AP37088 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.75■□□□□ 0.75
SCNN1AP37088 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SCNN1AP37088 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.75■□□□□ 0.75
SCNN1AP37088 TSPY14P-201ENST00000303979 915 ntBASIC19.75■□□□□ 0.75
SCNN1AP37088 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCNN1AP37088 AL390955.1-201ENST00000428694 934 ntBASIC19.75■□□□□ 0.75
SCNN1AP37088 AC008622.2-201ENST00000617006 1229 ntBASIC19.75■□□□□ 0.75
SCNN1AP37088 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.75■□□□□ 0.75
SCNN1AP37088 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.75■□□□□ 0.75
SCNN1AP37088 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
SCNN1AP37088 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCNN1AP37088 AL031598.1-201ENST00000561511 1773 ntBASIC19.75■□□□□ 0.75
SCNN1AP37088 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
SCNN1AP37088 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCNN1AP37088 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCNN1AP37088 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCNN1AP37088 AL109659.2-201ENST00000606809 1674 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms