Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCND1P24385 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCND1P24385 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCND1P24385 POM121L13P-201ENST00000422362 380 ntBASIC19.1■□□□□ 0.65
CCND1P24385 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.1■□□□□ 0.65
CCND1P24385 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.1■□□□□ 0.65
CCND1P24385 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCND1P24385 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCND1P24385 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.1■□□□□ 0.65
CCND1P24385 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.1■□□□□ 0.65
CCND1P24385 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCND1P24385 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCND1P24385 TFP1-202ENST00000475455 1573 ntBASIC19.1■□□□□ 0.65
CCND1P24385 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.1■□□□□ 0.65
CCND1P24385 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCND1P24385 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCND1P24385 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
CCND1P24385 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCND1P24385 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.09■□□□□ 0.65
CCND1P24385 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.09■□□□□ 0.65
CCND1P24385 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.09■□□□□ 0.65
CCND1P24385 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.09■□□□□ 0.65
CCND1P24385 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.09■□□□□ 0.65
CCND1P24385 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.09■□□□□ 0.65
CCND1P24385 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.09■□□□□ 0.65
CCND1P24385 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
CCND1P24385 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.09■□□□□ 0.65
CCND1P24385 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.09■□□□□ 0.65
CCND1P24385 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.09■□□□□ 0.65
CCND1P24385 AC026366.1-201ENST00000488803 879 ntBASIC19.09■□□□□ 0.65
CCND1P24385 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.09■□□□□ 0.65
CCND1P24385 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CCND1P24385 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.09■□□□□ 0.65
CCND1P24385 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.09■□□□□ 0.65
CCND1P24385 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCND1P24385 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCND1P24385 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCND1P24385 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CCND1P24385 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCND1P24385 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCND1P24385 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CCND1P24385 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.08■□□□□ 0.65
CCND1P24385 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCND1P24385 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCND1P24385 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.08■□□□□ 0.65
CCND1P24385 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCND1P24385 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCND1P24385 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.08■□□□□ 0.64
CCND1P24385 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.08■□□□□ 0.64
CCND1P24385 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CCND1P24385 KRT17P3-201ENST00000420566 1262 ntBASIC19.08■□□□□ 0.64
CCND1P24385 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.08■□□□□ 0.64
CCND1P24385 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CCND1P24385 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.08■□□□□ 0.64
CCND1P24385 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCND1P24385 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.08■□□□□ 0.64
CCND1P24385 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCND1P24385 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCND1P24385 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCND1P24385 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCND1P24385 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCND1P24385 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
CCND1P24385 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCND1P24385 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.08■□□□□ 0.64
CCND1P24385 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCND1P24385 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCND1P24385 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CCND1P24385 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.08■□□□□ 0.64
CCND1P24385 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCND1P24385 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.08■□□□□ 0.64
CCND1P24385 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.08■□□□□ 0.64
CCND1P24385 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCND1P24385 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCND1P24385 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CCND1P24385 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCND1P24385 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms