Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.92■□□□□ 0.14
SIX6O95475 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SIX6O95475 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.92■□□□□ 0.14
SIX6O95475 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SIX6O95475 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SIX6O95475 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SIX6O95475 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.92■□□□□ 0.14
SIX6O95475 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.92■□□□□ 0.14
SIX6O95475 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SIX6O95475 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
SIX6O95475 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SIX6O95475 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX6O95475 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX6O95475 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SIX6O95475 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SIX6O95475 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.91■□□□□ 0.14
SIX6O95475 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.91■□□□□ 0.14
SIX6O95475 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX6O95475 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX6O95475 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.91■□□□□ 0.14
SIX6O95475 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX6O95475 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.91■□□□□ 0.14
SIX6O95475 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.91■□□□□ 0.14
SIX6O95475 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.91■□□□□ 0.14
SIX6O95475 DUX4L2-201ENST00000561772 1275 ntBASIC15.91■□□□□ 0.14
SIX6O95475 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.91■□□□□ 0.14
SIX6O95475 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.91■□□□□ 0.14
SIX6O95475 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.91■□□□□ 0.14
SIX6O95475 DUX4L6-201ENST00000626483 1275 ntBASIC15.91■□□□□ 0.14
SIX6O95475 DUX4L1-201ENST00000627662 1275 ntBASIC15.91■□□□□ 0.14
SIX6O95475 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.91■□□□□ 0.14
SIX6O95475 DUX4L8-201ENST00000629013 1275 ntBASIC15.91■□□□□ 0.14
SIX6O95475 DUX4L3-201ENST00000630187 1275 ntBASIC15.91■□□□□ 0.14
SIX6O95475 DUX4L7-201ENST00000630678 1275 ntBASIC15.91■□□□□ 0.14
SIX6O95475 DUX4L5-201ENST00000630834 1275 ntBASIC15.91■□□□□ 0.14
SIX6O95475 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SIX6O95475 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.91■□□□□ 0.14
SIX6O95475 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.91■□□□□ 0.14
SIX6O95475 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX6O95475 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX6O95475 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.91■□□□□ 0.14
SIX6O95475 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX6O95475 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.91■□□□□ 0.14
SIX6O95475 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX6O95475 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX6O95475 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SIX6O95475 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
SIX6O95475 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX6O95475 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SIX6O95475 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SIX6O95475 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.9■□□□□ 0.14
SIX6O95475 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.9■□□□□ 0.14
SIX6O95475 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.9■□□□□ 0.14
SIX6O95475 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.9■□□□□ 0.14
SIX6O95475 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SIX6O95475 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.9■□□□□ 0.14
SIX6O95475 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.9■□□□□ 0.14
SIX6O95475 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.9■□□□□ 0.14
SIX6O95475 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 AC012414.1-201ENST00000556676 535 ntBASIC15.9■□□□□ 0.14
SIX6O95475 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.9■□□□□ 0.14
SIX6O95475 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
SIX6O95475 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.9■□□□□ 0.14
SIX6O95475 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
SIX6O95475 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SIX6O95475 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SIX6O95475 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.9■□□□□ 0.14
SIX6O95475 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIX6O95475 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.9■□□□□ 0.14
SIX6O95475 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
SIX6O95475 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.14
SIX6O95475 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.89■□□□□ 0.13
SIX6O95475 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SIX6O95475 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIX6O95475 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX6O95475 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIX6O95475 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms