Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PHF1O43189 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
PHF1O43189 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PHF1O43189 BCL2-203ENST00000589955 5011 ntBASIC16.42■□□□□ 0.22
PHF1O43189 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PHF1O43189 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PHF1O43189 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PHF1O43189 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PHF1O43189 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PHF1O43189 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.42■□□□□ 0.22
PHF1O43189 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.42■□□□□ 0.22
PHF1O43189 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PHF1O43189 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PHF1O43189 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PHF1O43189 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PHF1O43189 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.42■□□□□ 0.22
PHF1O43189 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PHF1O43189 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PHF1O43189 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PHF1O43189 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHF1O43189 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PHF1O43189 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.41■□□□□ 0.22
PHF1O43189 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.41■□□□□ 0.22
PHF1O43189 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.41■□□□□ 0.22
PHF1O43189 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.41■□□□□ 0.22
PHF1O43189 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.41■□□□□ 0.22
PHF1O43189 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHF1O43189 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PHF1O43189 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.41■□□□□ 0.22
PHF1O43189 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PHF1O43189 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PHF1O43189 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.41■□□□□ 0.22
PHF1O43189 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PHF1O43189 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.41■□□□□ 0.22
PHF1O43189 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PHF1O43189 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PHF1O43189 AC087388.1-201ENST00000571370 1112 ntBASIC16.41■□□□□ 0.22
PHF1O43189 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.41■□□□□ 0.22
PHF1O43189 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PHF1O43189 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHF1O43189 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PHF1O43189 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHF1O43189 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHF1O43189 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
PHF1O43189 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHF1O43189 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHF1O43189 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.41■□□□□ 0.22
PHF1O43189 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PHF1O43189 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PHF1O43189 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PHF1O43189 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHF1O43189 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHF1O43189 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHF1O43189 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHF1O43189 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PHF1O43189 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHF1O43189 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHF1O43189 AC113347.1-201ENST00000413321 391 ntBASIC16.4■□□□□ 0.22
PHF1O43189 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.4■□□□□ 0.22
PHF1O43189 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
PHF1O43189 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHF1O43189 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHF1O43189 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.4■□□□□ 0.22
PHF1O43189 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.4■□□□□ 0.22
PHF1O43189 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PHF1O43189 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.4■□□□□ 0.22
PHF1O43189 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PHF1O43189 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.4■□□□□ 0.22
PHF1O43189 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.4■□□□□ 0.22
PHF1O43189 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.4■□□□□ 0.22
PHF1O43189 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.4■□□□□ 0.22
PHF1O43189 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHF1O43189 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHF1O43189 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PHF1O43189 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
PHF1O43189 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PHF1O43189 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHF1O43189 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PHF1O43189 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHF1O43189 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHF1O43189 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PHF1O43189 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.39■□□□□ 0.21
PHF1O43189 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHF1O43189 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PHF1O43189 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHF1O43189 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
PHF1O43189 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.39■□□□□ 0.21
PHF1O43189 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PHF1O43189 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.39■□□□□ 0.21
PHF1O43189 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.39■□□□□ 0.21
PHF1O43189 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PHF1O43189 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PHF1O43189 NTF6B-201ENST00000591913 560 ntBASIC16.39■□□□□ 0.21
PHF1O43189 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHF1O43189 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.39■□□□□ 0.21
PHF1O43189 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PHF1O43189 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PHF1O43189 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PHF1O43189 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHF1O43189 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms