Protein–RNA interactions for Protein: Q9Y5L0

TNPO3, Transportin-3, humanhuman

Known RBP Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3Q9Y5L0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.57■□□□□ 0.56
TNPO3Q9Y5L0 AC083906.6-201ENST00000641366 219 ntBASIC18.57■□□□□ 0.56
TNPO3Q9Y5L0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.57■□□□□ 0.56
TNPO3Q9Y5L0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
TNPO3Q9Y5L0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.57■□□□□ 0.56
TNPO3Q9Y5L0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNPO3Q9Y5L0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNPO3Q9Y5L0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TNPO3Q9Y5L0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TNPO3Q9Y5L0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 TSPY23P-201ENST00000440136 739 ntBASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 AC110285.5-201ENST00000611501 352 ntBASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNPO3Q9Y5L0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 AC020763.4-201ENST00000623414 4170 ntBASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 RN7SL471P-201ENST00000580476 299 ntBASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 AC124016.1-201ENST00000609552 612 ntBASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 AL512353.2-201ENST00000448759 1962 ntBASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNPO3Q9Y5L0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 KRT8P41-201ENST00000533985 1514 ntBASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 AL445675.2-201ENST00000620291 557 ntBASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNPO3Q9Y5L0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms