Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 CROCCP3-202ENST00000420820 1947 ntBASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 AC073508.3-201ENST00000619697 1419 ntBASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 AC010947.1-201ENST00000623454 693 ntBASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PCDHGA7Q9Y5G6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 CYP2D8P-201ENST00000433633 1490 ntBASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGA7Q9Y5G6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 AC005082.1-201ENST00000413042 2259 ntBASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 LETM1P2-201ENST00000597330 2178 ntBASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 AL390955.1-201ENST00000428694 934 ntBASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 KRT18P57-201ENST00000443599 1254 ntBASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 SLC25A3P1-201ENST00000443844 931 ntBASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGA7Q9Y5G6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 KRT8P20-201ENST00000423953 1409 ntBASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA7Q9Y5G6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms