Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 AC139887.4-201ENST00000607877 719 ntBASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 NTF6B-201ENST00000591913 560 ntBASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 AFG3L1P-217ENST00000557444 2447 ntBASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 KRT8P45-201ENST00000414328 1447 ntBASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.04□□□□□ -0.32
LINC00588Q9Y4M8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 YBX1P2-201ENST00000489612 999 ntBASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 WWOX-216ENST00000569818 525 ntBASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00588Q9Y4M8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00588Q9Y4M8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00588Q9Y4M8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
LINC00588Q9Y4M8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00588Q9Y4M8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00588Q9Y4M8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00588Q9Y4M8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00588Q9Y4M8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00588Q9Y4M8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LINC00588Q9Y4M8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.02□□□□□ -0.32
LINC00588Q9Y4M8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
LINC00588Q9Y4M8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00588Q9Y4M8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00588Q9Y4M8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LINC00588Q9Y4M8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.02□□□□□ -0.33
LINC00588Q9Y4M8 RNF152P1-201ENST00000397754 604 ntBASIC13.02□□□□□ -0.33
LINC00588Q9Y4M8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00588Q9Y4M8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00588Q9Y4M8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00588Q9Y4M8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.02□□□□□ -0.33
LINC00588Q9Y4M8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms