Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 KRT17P3-201ENST00000420566 1262 ntBASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 AC026366.1-201ENST00000488803 879 ntBASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 C1QL1P1-201ENST00000568105 661 ntBASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 AC009113.1-201ENST00000570267 2443 ntBASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NLRC4Q9NPP4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
NLRC4Q9NPP4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NLRC4Q9NPP4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.64■□□□□ 0.9
NLRC4Q9NPP4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NLRC4Q9NPP4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 AL512353.2-201ENST00000448759 1962 ntBASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.64■□□□□ 0.89
NLRC4Q9NPP4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 AL160286.2-201ENST00000567150 934 ntBASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 AC004264.1-201ENST00000608354 794 ntBASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 AL023875.1-201ENST00000640777 796 ntBASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 WIZP1-201ENST00000531444 2299 ntBASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NLRC4Q9NPP4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NLRC4Q9NPP4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NLRC4Q9NPP4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms