Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC004264.1-201ENST00000608354 794 ntBASIC19.04■□□□□ 0.64
CPNE1Q99829 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE1Q99829 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.04■□□□□ 0.64
CPNE1Q99829 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE1Q99829 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE1Q99829 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE1Q99829 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.04■□□□□ 0.64
CPNE1Q99829 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE1Q99829 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE1Q99829 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CPNE1Q99829 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CPNE1Q99829 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.04■□□□□ 0.64
CPNE1Q99829 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.04■□□□□ 0.64
CPNE1Q99829 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE1Q99829 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
CPNE1Q99829 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CPNE1Q99829 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CPNE1Q99829 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.03■□□□□ 0.64
CPNE1Q99829 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
CPNE1Q99829 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CPNE1Q99829 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CPNE1Q99829 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CPNE1Q99829 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 TSPY23P-201ENST00000440136 739 ntBASIC19.03■□□□□ 0.64
CPNE1Q99829 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.03■□□□□ 0.64
CPNE1Q99829 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.03■□□□□ 0.64
CPNE1Q99829 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE1Q99829 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.03■□□□□ 0.64
CPNE1Q99829 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CPNE1Q99829 AC135050.7-201ENST00000624508 2218 ntBASIC19.02■□□□□ 0.64
CPNE1Q99829 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE1Q99829 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.02■□□□□ 0.64
CPNE1Q99829 AC020763.4-201ENST00000623414 4170 ntBASIC19.02■□□□□ 0.64
CPNE1Q99829 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.02■□□□□ 0.64
CPNE1Q99829 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE1Q99829 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE1Q99829 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CPNE1Q99829 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE1Q99829 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE1Q99829 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE1Q99829 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.02■□□□□ 0.64
CPNE1Q99829 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.02■□□□□ 0.64
CPNE1Q99829 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE1Q99829 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.02■□□□□ 0.64
CPNE1Q99829 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.02■□□□□ 0.64
CPNE1Q99829 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE1Q99829 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE1Q99829 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE1Q99829 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.02■□□□□ 0.63
CPNE1Q99829 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
CPNE1Q99829 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CPNE1Q99829 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CPNE1Q99829 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CPNE1Q99829 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.02■□□□□ 0.63
CPNE1Q99829 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CPNE1Q99829 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE1Q99829 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE1Q99829 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE1Q99829 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CPNE1Q99829 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.01■□□□□ 0.63
CPNE1Q99829 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CPNE1Q99829 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE1Q99829 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE1Q99829 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE1Q99829 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE1Q99829 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CPNE1Q99829 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.01■□□□□ 0.63
CPNE1Q99829 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.01■□□□□ 0.63
CPNE1Q99829 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE1Q99829 AC008403.3-201ENST00000598924 454 ntBASIC19.01■□□□□ 0.63
CPNE1Q99829 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.01■□□□□ 0.63
CPNE1Q99829 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE1Q99829 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.01■□□□□ 0.63
CPNE1Q99829 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE1Q99829 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.01■□□□□ 0.63
CPNE1Q99829 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE1Q99829 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.01■□□□□ 0.63
CPNE1Q99829 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE1Q99829 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE1Q99829 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms