Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00346Q8IVM7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00346Q8IVM7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.86■□□□□ 0.29
LINC00346Q8IVM7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00346Q8IVM7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00346Q8IVM7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00346Q8IVM7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00346Q8IVM7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00346Q8IVM7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00346Q8IVM7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 AC006058.3-201ENST00000606217 1069 ntBASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 FEM1AP3-201ENST00000403722 1741 ntBASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00346Q8IVM7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.83■□□□□ 0.29
LINC00346Q8IVM7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
LINC00346Q8IVM7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
LINC00346Q8IVM7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
LINC00346Q8IVM7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LINC00346Q8IVM7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.83■□□□□ 0.28
LINC00346Q8IVM7 MIR4651-201ENST00000582622 73 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms