Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 TSPY21P-201ENST00000433481 731 ntBASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATP13A4Q4VNC1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATP13A4Q4VNC1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATP13A4Q4VNC1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATP13A4Q4VNC1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
ATP13A4Q4VNC1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ATP13A4Q4VNC1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP13A4Q4VNC1 AC004980.1-204ENST00000429707 299 ntBASIC19.84■□□□□ 0.77
ATP13A4Q4VNC1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ATP13A4Q4VNC1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.84■□□□□ 0.77
ATP13A4Q4VNC1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.84■□□□□ 0.77
ATP13A4Q4VNC1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
ATP13A4Q4VNC1 AL445675.2-201ENST00000620291 557 ntBASIC19.84■□□□□ 0.77
ATP13A4Q4VNC1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.84■□□□□ 0.77
ATP13A4Q4VNC1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP13A4Q4VNC1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.84■□□□□ 0.77
ATP13A4Q4VNC1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.84■□□□□ 0.77
ATP13A4Q4VNC1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP13A4Q4VNC1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ATP13A4Q4VNC1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATP13A4Q4VNC1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ATP13A4Q4VNC1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP13A4Q4VNC1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ATP13A4Q4VNC1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.83■□□□□ 0.77
ATP13A4Q4VNC1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP13A4Q4VNC1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.83■□□□□ 0.77
ATP13A4Q4VNC1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.83■□□□□ 0.77
ATP13A4Q4VNC1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP13A4Q4VNC1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
ATP13A4Q4VNC1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATP13A4Q4VNC1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.83■□□□□ 0.77
ATP13A4Q4VNC1 NIFKP9-201ENST00000419265 221 ntBASIC19.83■□□□□ 0.77
ATP13A4Q4VNC1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.83■□□□□ 0.77
ATP13A4Q4VNC1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.83■□□□□ 0.77
ATP13A4Q4VNC1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
ATP13A4Q4VNC1 AL359736.2-201ENST00000621992 437 ntBASIC19.83■□□□□ 0.77
ATP13A4Q4VNC1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.83■□□□□ 0.77
ATP13A4Q4VNC1 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.83■□□□□ 0.77
ATP13A4Q4VNC1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.83■□□□□ 0.76
ATP13A4Q4VNC1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP13A4Q4VNC1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP13A4Q4VNC1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP13A4Q4VNC1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP13A4Q4VNC1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP13A4Q4VNC1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.82■□□□□ 0.76
ATP13A4Q4VNC1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP13A4Q4VNC1 AC009113.1-201ENST00000570267 2443 ntBASIC19.82■□□□□ 0.76
ATP13A4Q4VNC1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP13A4Q4VNC1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP13A4Q4VNC1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP13A4Q4VNC1 FAM201B-201ENST00000458407 597 ntBASIC19.82■□□□□ 0.76
ATP13A4Q4VNC1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP13A4Q4VNC1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP13A4Q4VNC1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP13A4Q4VNC1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP13A4Q4VNC1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP13A4Q4VNC1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.82■□□□□ 0.76
ATP13A4Q4VNC1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP13A4Q4VNC1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP13A4Q4VNC1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP13A4Q4VNC1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP13A4Q4VNC1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP13A4Q4VNC1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP13A4Q4VNC1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
ATP13A4Q4VNC1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP13A4Q4VNC1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP13A4Q4VNC1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP13A4Q4VNC1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP13A4Q4VNC1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP13A4Q4VNC1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP13A4Q4VNC1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP13A4Q4VNC1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ATP13A4Q4VNC1 AC093525.10-201ENST00000625130 1569 ntBASIC19.81■□□□□ 0.76
ATP13A4Q4VNC1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP13A4Q4VNC1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP13A4Q4VNC1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ATP13A4Q4VNC1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP13A4Q4VNC1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP13A4Q4VNC1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms