Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CKS2P33552 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.02□□□□□ -0.17
CKS2P33552 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.02□□□□□ -0.17
CKS2P33552 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.02□□□□□ -0.17
CKS2P33552 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.02□□□□□ -0.17
CKS2P33552 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.02□□□□□ -0.17
CKS2P33552 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.02□□□□□ -0.17
CKS2P33552 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.02□□□□□ -0.17
CKS2P33552 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.02□□□□□ -0.17
CKS2P33552 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CKS2P33552 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CKS2P33552 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
CKS2P33552 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.02□□□□□ -0.17
CKS2P33552 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CKS2P33552 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CKS2P33552 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.02□□□□□ -0.17
CKS2P33552 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CKS2P33552 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CKS2P33552 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.02□□□□□ -0.17
CKS2P33552 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.01□□□□□ -0.17
CKS2P33552 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CKS2P33552 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS2P33552 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS2P33552 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CKS2P33552 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CKS2P33552 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS2P33552 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.01□□□□□ -0.17
CKS2P33552 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.01□□□□□ -0.17
CKS2P33552 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS2P33552 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
CKS2P33552 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS2P33552 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CKS2P33552 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CKS2P33552 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS2P33552 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CKS2P33552 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CKS2P33552 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.01□□□□□ -0.17
CKS2P33552 AP001330.3-201ENST00000520123 633 ntBASIC14.01□□□□□ -0.17
CKS2P33552 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC14.01□□□□□ -0.17
CKS2P33552 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CKS2P33552 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CKS2P33552 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CKS2P33552 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS2P33552 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.01□□□□□ -0.17
CKS2P33552 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CKS2P33552 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS2P33552 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CKS2P33552 AC067852.2-201ENST00000590513 2313 ntBASIC14.01□□□□□ -0.17
CKS2P33552 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CKS2P33552 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CKS2P33552 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CKS2P33552 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14□□□□□ -0.17
CKS2P33552 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14□□□□□ -0.17
CKS2P33552 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14□□□□□ -0.17
CKS2P33552 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CKS2P33552 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14□□□□□ -0.17
CKS2P33552 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14□□□□□ -0.17
CKS2P33552 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CKS2P33552 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CKS2P33552 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14□□□□□ -0.17
CKS2P33552 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14□□□□□ -0.17
CKS2P33552 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14□□□□□ -0.17
CKS2P33552 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CKS2P33552 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14□□□□□ -0.17
CKS2P33552 NME4-202ENST00000382940 766 ntTSL 3 BASIC14□□□□□ -0.17
CKS2P33552 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14□□□□□ -0.17
CKS2P33552 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14□□□□□ -0.17
CKS2P33552 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14□□□□□ -0.17
CKS2P33552 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CKS2P33552 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14□□□□□ -0.17
CKS2P33552 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14□□□□□ -0.17
CKS2P33552 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14□□□□□ -0.17
CKS2P33552 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CKS2P33552 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14□□□□□ -0.17
CKS2P33552 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14□□□□□ -0.17
CKS2P33552 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14□□□□□ -0.17
CKS2P33552 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14□□□□□ -0.17
CKS2P33552 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CKS2P33552 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14□□□□□ -0.17
CKS2P33552 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CKS2P33552 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CKS2P33552 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14□□□□□ -0.17
CKS2P33552 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CKS2P33552 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CKS2P33552 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CKS2P33552 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CKS2P33552 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.99□□□□□ -0.17
CKS2P33552 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CKS2P33552 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.99□□□□□ -0.17
CKS2P33552 ZNF815P-204ENST00000434898 1737 ntBASIC13.99□□□□□ -0.17
CKS2P33552 AC019069.1-201ENST00000610008 1333 ntBASIC13.99□□□□□ -0.17
CKS2P33552 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC13.99□□□□□ -0.17
CKS2P33552 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 EDA-201ENST00000338901 1233 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms