Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AC092338.2-201ENST00000568827 1415 ntBASIC17.29■□□□□ 0.36
GDF1P27539 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GDF1P27539 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GDF1P27539 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.28■□□□□ 0.36
GDF1P27539 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.28■□□□□ 0.36
GDF1P27539 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.28■□□□□ 0.36
GDF1P27539 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GDF1P27539 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GDF1P27539 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GDF1P27539 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
GDF1P27539 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.28■□□□□ 0.36
GDF1P27539 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GDF1P27539 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
GDF1P27539 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.28■□□□□ 0.36
GDF1P27539 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.28■□□□□ 0.36
GDF1P27539 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.28■□□□□ 0.36
GDF1P27539 AL023803.3-201ENST00000615559 522 ntBASIC17.28■□□□□ 0.36
GDF1P27539 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GDF1P27539 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.28■□□□□ 0.36
GDF1P27539 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GDF1P27539 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.28■□□□□ 0.36
GDF1P27539 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GDF1P27539 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.28■□□□□ 0.36
GDF1P27539 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GDF1P27539 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GDF1P27539 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.27■□□□□ 0.36
GDF1P27539 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.27■□□□□ 0.36
GDF1P27539 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.27■□□□□ 0.36
GDF1P27539 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDF1P27539 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDF1P27539 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDF1P27539 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDF1P27539 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDF1P27539 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDF1P27539 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDF1P27539 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDF1P27539 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.27■□□□□ 0.36
GDF1P27539 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDF1P27539 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDF1P27539 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.27■□□□□ 0.36
GDF1P27539 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
GDF1P27539 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.27■□□□□ 0.36
GDF1P27539 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
GDF1P27539 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GDF1P27539 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.27■□□□□ 0.36
GDF1P27539 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.27■□□□□ 0.35
GDF1P27539 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GDF1P27539 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GDF1P27539 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GDF1P27539 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
GDF1P27539 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
GDF1P27539 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDF1P27539 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GDF1P27539 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDF1P27539 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDF1P27539 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDF1P27539 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDF1P27539 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDF1P27539 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GDF1P27539 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
GDF1P27539 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.26■□□□□ 0.35
GDF1P27539 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.26■□□□□ 0.35
GDF1P27539 AP003041.3-201ENST00000527151 707 ntBASIC17.26■□□□□ 0.35
GDF1P27539 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.26■□□□□ 0.35
GDF1P27539 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
GDF1P27539 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.26■□□□□ 0.35
GDF1P27539 AC010331.1-201ENST00000611423 582 ntBASIC17.26■□□□□ 0.35
GDF1P27539 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
GDF1P27539 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.26■□□□□ 0.35
GDF1P27539 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDF1P27539 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDF1P27539 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.26■□□□□ 0.35
GDF1P27539 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GDF1P27539 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
GDF1P27539 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.26■□□□□ 0.35
GDF1P27539 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.26■□□□□ 0.35
GDF1P27539 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
GDF1P27539 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDF1P27539 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.25■□□□□ 0.35
GDF1P27539 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
GDF1P27539 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
GDF1P27539 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDF1P27539 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GDF1P27539 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
GDF1P27539 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.25■□□□□ 0.35
GDF1P27539 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.25■□□□□ 0.35
GDF1P27539 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.25■□□□□ 0.35
GDF1P27539 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.25■□□□□ 0.35
GDF1P27539 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.25■□□□□ 0.35
GDF1P27539 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDF1P27539 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDF1P27539 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDF1P27539 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDF1P27539 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
GDF1P27539 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
GDF1P27539 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.24■□□□□ 0.35
GDF1P27539 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.24■□□□□ 0.35
GDF1P27539 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDF1P27539 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GDF1P27539 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms