Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN3P26045 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN3P26045 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN3P26045 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.43■□□□□ 0.7
PTPN3P26045 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN3P26045 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN3P26045 AL135905.2-201ENST00000584934 1404 ntBASIC19.42■□□□□ 0.7
PTPN3P26045 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN3P26045 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN3P26045 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN3P26045 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN3P26045 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN3P26045 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN3P26045 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN3P26045 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PTPN3P26045 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN3P26045 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN3P26045 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN3P26045 AC004951.3-201ENST00000418645 1148 ntBASIC19.42■□□□□ 0.7
PTPN3P26045 FAM197Y1-201ENST00000421178 764 ntBASIC19.42■□□□□ 0.7
PTPN3P26045 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN3P26045 AC008040.2-201ENST00000461049 708 ntBASIC19.42■□□□□ 0.7
PTPN3P26045 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PTPN3P26045 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.42■□□□□ 0.7
PTPN3P26045 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.42■□□□□ 0.7
PTPN3P26045 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PTPN3P26045 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN3P26045 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN3P26045 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PTPN3P26045 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPN3P26045 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN3P26045 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN3P26045 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN3P26045 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN3P26045 AC011506.1-201ENST00000474329 610 ntBASIC19.41■□□□□ 0.7
PTPN3P26045 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN3P26045 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN3P26045 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
PTPN3P26045 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN3P26045 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN3P26045 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN3P26045 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN3P26045 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN3P26045 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN3P26045 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN3P26045 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN3P26045 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN3P26045 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN3P26045 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PTPN3P26045 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
PTPN3P26045 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN3P26045 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN3P26045 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN3P26045 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.4■□□□□ 0.7
PTPN3P26045 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN3P26045 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.4■□□□□ 0.7
PTPN3P26045 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPN3P26045 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.4■□□□□ 0.7
PTPN3P26045 AC011298.2-201ENST00000617989 482 ntBASIC19.4■□□□□ 0.7
PTPN3P26045 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PTPN3P26045 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN3P26045 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PTPN3P26045 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPN3P26045 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN3P26045 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN3P26045 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTPN3P26045 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTPN3P26045 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
PTPN3P26045 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PTPN3P26045 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN3P26045 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN3P26045 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN3P26045 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PTPN3P26045 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN3P26045 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PTPN3P26045 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN3P26045 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PTPN3P26045 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN3P26045 RPS2P55-201ENST00000397318 883 ntBASIC19.39■□□□□ 0.69
PTPN3P26045 MESTP1-201ENST00000404287 994 ntBASIC19.39■□□□□ 0.69
PTPN3P26045 B3GAT3P1-201ENST00000471720 806 ntBASIC19.39■□□□□ 0.69
PTPN3P26045 AC107956.1-201ENST00000494359 873 ntBASIC19.39■□□□□ 0.69
PTPN3P26045 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN3P26045 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN3P26045 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PTPN3P26045 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN3P26045 CD177P1-201ENST00000606252 935 ntBASIC19.39■□□□□ 0.69
PTPN3P26045 AC130371.2-201ENST00000619443 611 ntBASIC19.39■□□□□ 0.69
PTPN3P26045 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN3P26045 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN3P26045 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN3P26045 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN3P26045 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.39■□□□□ 0.69
PTPN3P26045 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN3P26045 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN3P26045 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN3P26045 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.39■□□□□ 0.69
PTPN3P26045 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.39■□□□□ 0.69
PTPN3P26045 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN3P26045 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms