Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT3P12035 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
KRT3P12035 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
KRT3P12035 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT3P12035 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.07■□□□□ 0.8
KRT3P12035 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT3P12035 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT3P12035 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.07■□□□□ 0.8
KRT3P12035 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.07■□□□□ 0.8
KRT3P12035 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.07■□□□□ 0.8
KRT3P12035 AL031985.4-201ENST00000642138 673 ntBASIC20.07■□□□□ 0.8
KRT3P12035 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
KRT3P12035 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT3P12035 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
KRT3P12035 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT3P12035 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT3P12035 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT3P12035 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT3P12035 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT3P12035 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
KRT3P12035 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
KRT3P12035 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT3P12035 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT3P12035 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT3P12035 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT3P12035 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT3P12035 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT3P12035 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.06■□□□□ 0.8
KRT3P12035 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
KRT3P12035 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT3P12035 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
KRT3P12035 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.06■□□□□ 0.8
KRT3P12035 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.06■□□□□ 0.8
KRT3P12035 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.06■□□□□ 0.8
KRT3P12035 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT3P12035 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT3P12035 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
KRT3P12035 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT3P12035 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT3P12035 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
KRT3P12035 AC006333.2-201ENST00000607957 2099 ntBASIC20.06■□□□□ 0.8
KRT3P12035 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT3P12035 AC004408.2-201ENST00000623613 2777 ntBASIC20.06■□□□□ 0.8
KRT3P12035 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT3P12035 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KRT3P12035 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT3P12035 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT3P12035 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT3P12035 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT3P12035 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT3P12035 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KRT3P12035 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT3P12035 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.05■□□□□ 0.8
KRT3P12035 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT3P12035 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT3P12035 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT3P12035 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT3P12035 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT3P12035 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT3P12035 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT3P12035 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT3P12035 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT3P12035 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT3P12035 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
KRT3P12035 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT3P12035 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
KRT3P12035 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT3P12035 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
KRT3P12035 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
KRT3P12035 HCG11-201ENST00000411553 5696 ntBASIC20.05■□□□□ 0.8
KRT3P12035 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT3P12035 RCC2P6-201ENST00000526625 1557 ntBASIC20.04■□□□□ 0.8
KRT3P12035 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.04■□□□□ 0.8
KRT3P12035 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT3P12035 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT3P12035 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT3P12035 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT3P12035 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT3P12035 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT3P12035 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT3P12035 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT3P12035 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
KRT3P12035 AC026271.3-201ENST00000571884 352 ntBASIC20.04■□□□□ 0.8
KRT3P12035 TMEM191A-211ENST00000637163 1067 ntBASIC20.04■□□□□ 0.8
KRT3P12035 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT3P12035 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT3P12035 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT3P12035 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.04■□□□□ 0.8
KRT3P12035 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT3P12035 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT3P12035 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT3P12035 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT3P12035 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT3P12035 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT3P12035 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.03■□□□□ 0.8
KRT3P12035 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
KRT3P12035 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT3P12035 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT3P12035 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT3P12035 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms