Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.36■□□□□ 0.69
RIPK2O43353 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RIPK2O43353 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.36■□□□□ 0.69
RIPK2O43353 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK2O43353 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.35■□□□□ 0.69
RIPK2O43353 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.35■□□□□ 0.69
RIPK2O43353 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK2O43353 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.35■□□□□ 0.69
RIPK2O43353 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
RIPK2O43353 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK2O43353 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK2O43353 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RIPK2O43353 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK2O43353 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.35■□□□□ 0.69
RIPK2O43353 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.35■□□□□ 0.69
RIPK2O43353 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.35■□□□□ 0.69
RIPK2O43353 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK2O43353 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.35■□□□□ 0.69
RIPK2O43353 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.35■□□□□ 0.69
RIPK2O43353 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.35■□□□□ 0.69
RIPK2O43353 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK2O43353 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK2O43353 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK2O43353 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RIPK2O43353 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK2O43353 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.35■□□□□ 0.69
RIPK2O43353 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK2O43353 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK2O43353 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.35■□□□□ 0.69
RIPK2O43353 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RIPK2O43353 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RIPK2O43353 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK2O43353 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK2O43353 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.34■□□□□ 0.69
RIPK2O43353 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.34■□□□□ 0.69
RIPK2O43353 AC006557.6-201ENST00000623071 864 ntBASIC19.34■□□□□ 0.69
RIPK2O43353 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK2O43353 AL162741.1-201ENST00000565563 1558 ntBASIC19.34■□□□□ 0.69
RIPK2O43353 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RIPK2O43353 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
RIPK2O43353 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RIPK2O43353 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK2O43353 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RIPK2O43353 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK2O43353 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK2O43353 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK2O43353 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK2O43353 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.34■□□□□ 0.69
RIPK2O43353 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.34■□□□□ 0.69
RIPK2O43353 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RIPK2O43353 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RIPK2O43353 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RIPK2O43353 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.33■□□□□ 0.69
RIPK2O43353 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RIPK2O43353 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RIPK2O43353 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RIPK2O43353 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
RIPK2O43353 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RIPK2O43353 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
RIPK2O43353 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.33■□□□□ 0.68
RIPK2O43353 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.33■□□□□ 0.68
RIPK2O43353 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RIPK2O43353 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.33■□□□□ 0.68
RIPK2O43353 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.33■□□□□ 0.68
RIPK2O43353 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
RIPK2O43353 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RIPK2O43353 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.33■□□□□ 0.68
RIPK2O43353 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
RIPK2O43353 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RIPK2O43353 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RIPK2O43353 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RIPK2O43353 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.33■□□□□ 0.68
RIPK2O43353 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RIPK2O43353 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RIPK2O43353 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RIPK2O43353 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.32■□□□□ 0.68
RIPK2O43353 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.32■□□□□ 0.68
RIPK2O43353 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RIPK2O43353 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK2O43353 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.32■□□□□ 0.68
RIPK2O43353 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RIPK2O43353 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK2O43353 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.32■□□□□ 0.68
RIPK2O43353 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK2O43353 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.32■□□□□ 0.68
RIPK2O43353 KRT18P16-201ENST00000510337 1294 ntBASIC19.32■□□□□ 0.68
RIPK2O43353 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RIPK2O43353 AC133552.2-202ENST00000575694 574 ntBASIC19.32■□□□□ 0.68
RIPK2O43353 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK2O43353 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK2O43353 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK2O43353 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms