Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN5O00501 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN5O00501 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN5O00501 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN5O00501 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN5O00501 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN5O00501 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN5O00501 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN5O00501 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN5O00501 TSPY17P-201ENST00000450329 467 ntBASIC20.1■□□□□ 0.81
CLDN5O00501 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN5O00501 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN5O00501 AC008622.2-201ENST00000617006 1229 ntBASIC20.1■□□□□ 0.81
CLDN5O00501 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN5O00501 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN5O00501 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN5O00501 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN5O00501 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN5O00501 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN5O00501 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN5O00501 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN5O00501 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN5O00501 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN5O00501 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN5O00501 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN5O00501 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.09■□□□□ 0.81
CLDN5O00501 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN5O00501 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN5O00501 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN5O00501 AL137013.1-201ENST00000432946 1228 ntBASIC20.09■□□□□ 0.81
CLDN5O00501 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN5O00501 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.09■□□□□ 0.81
CLDN5O00501 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN5O00501 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
CLDN5O00501 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN5O00501 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN5O00501 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN5O00501 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.09■□□□□ 0.81
CLDN5O00501 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CLDN5O00501 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN5O00501 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.08■□□□□ 0.81
CLDN5O00501 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.08■□□□□ 0.81
CLDN5O00501 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN5O00501 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN5O00501 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN5O00501 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CLDN5O00501 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN5O00501 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.08■□□□□ 0.81
CLDN5O00501 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.08■□□□□ 0.81
CLDN5O00501 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CLDN5O00501 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CLDN5O00501 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.08■□□□□ 0.81
CLDN5O00501 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN5O00501 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
CLDN5O00501 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN5O00501 AC073508.3-201ENST00000619697 1419 ntBASIC20.08■□□□□ 0.8
CLDN5O00501 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.08■□□□□ 0.8
CLDN5O00501 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
CLDN5O00501 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN5O00501 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN5O00501 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN5O00501 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CLDN5O00501 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CLDN5O00501 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.07■□□□□ 0.8
CLDN5O00501 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN5O00501 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN5O00501 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN5O00501 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN5O00501 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN5O00501 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.07■□□□□ 0.8
CLDN5O00501 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN5O00501 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN5O00501 MIR4674-201ENST00000582457 87 ntBASIC20.07■□□□□ 0.8
CLDN5O00501 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CLDN5O00501 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN5O00501 AC010653.2-201ENST00000623505 997 ntBASIC20.07■□□□□ 0.8
CLDN5O00501 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN5O00501 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN5O00501 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN5O00501 FEM1AP3-201ENST00000403722 1741 ntBASIC20.07■□□□□ 0.8
CLDN5O00501 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN5O00501 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN5O00501 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN5O00501 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CLDN5O00501 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CLDN5O00501 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN5O00501 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN5O00501 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN5O00501 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN5O00501 HMGA1P5-201ENST00000412453 271 ntBASIC20.06■□□□□ 0.8
CLDN5O00501 TMPOP1-202ENST00000424642 1267 ntBASIC20.06■□□□□ 0.8
CLDN5O00501 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.06■□□□□ 0.8
CLDN5O00501 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CLDN5O00501 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN5O00501 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.06■□□□□ 0.8
CLDN5O00501 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.06■□□□□ 0.8
CLDN5O00501 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN5O00501 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN5O00501 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN5O00501 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms