Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 AC091076.1-201ENST00000610741 619 ntBASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.98■□□□□ 0.63
TBC1D3FA6NER0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 AC073130.3-201ENST00000624389 2278 ntBASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D3FA6NER0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.96■□□□□ 0.63
TBC1D3FA6NER0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3FA6NER0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3FA6NER0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3FA6NER0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3FA6NER0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3FA6NER0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3FA6NER0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.95■□□□□ 0.62
TBC1D3FA6NER0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3FA6NER0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.95■□□□□ 0.62
TBC1D3FA6NER0 NEK4P2-201ENST00000580004 1012 ntBASIC18.95■□□□□ 0.62
TBC1D3FA6NER0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3FA6NER0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.95■□□□□ 0.62
TBC1D3FA6NER0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D3FA6NER0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TBC1D3FA6NER0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 UPK3BP1-201ENST00000428678 509 ntBASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 MIR4674-201ENST00000582457 87 ntBASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms